| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0518 |
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| Symbol | |
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| ID | 6120921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 560386 |
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| End bp | 561384 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641648587 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001775157 |
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| Protein GI | 170729724 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.720779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTTA CCATCAGCCA GGTTCTGCGT CCTCGAGGTC CGCAGATCGA ACGTCTTACC
GAAAACCGTG CCAAGGTTGT ACTTGAGCCT TTGGGTCGCG GGTATGCTCA TACATTGGGT
AATGCATTGC GTCGTGTCCT GCTTTCTTCG ATTCCGGGAT CCGCGATTAC ACAAGTGGAA
ATTGATGGTG TGTTGCATGA GTACACCACC GTCGAAGGTT TGCAGGAAGA TGTGCTTGAA
GTTTTGTTAA ATCTTAAGGA TGTGGCGATC CGTATACATA GTGGTGATAC TGCTACTCTT
TCTTTATTTA AACAAGGAGC AGGAGTGGTG ACTGCTGCGG ATATTAAGAC GGATCATAAT
GTTGAAATTA TCAATGATGG TCACGTCATA TGTCATTTGA CTAAAGACAC TACAATCAAT
ATGCGTTTGA AAGTTGAGCG TGGTTTTGGT TACCAGCCTG CTGTTGTCCG TCGTCGTCCT
GATGATGAAA ATAGAACCAT TGGTCGTTTG ATTTTGGATG CCTCATTTTC TCCGGTTCGT
CGTGTTGCTT ATGTCGTTGA GGCAGCACGT GTAGAGCAAC GTACTGATTT GGATAAACTC
ATTATTGACA TCGAAACAAA TGGTACGATA GATGCTGAAG AAGCTCTTCG TACTGCTGCT
GATATTCTTA CTGATCAGCT GTCGGTGTTT GGTGATTTTA CGCACCGTGA TCGTGGTACA
GTCAAACCTG CTAGTAGTGG TGTGGATCCT GTGCTGCTTC GTCCAATTGA TGATTTGGAG
CTGACGGTGC GTTCTGCTAA TTGTTTGAAG GCGGAGAGTA TTTATTATAT TGGTGATCTT
ATCCAAAAAA CAGAGGTTGA GTTGCTTAAG ACTCCCAATT TAGGTAAGAA GTCGCTTACT
GAGATCAAAG AAGTTCTTGG CCAACGTGGC TTAGGACTTG GAGTGAAGTT GGAGAATTGG
CCGCCTCCAG GTGTTTCTCA ATATGGAATG CTTGGTTAA
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| Protein sequence | MTVTISQVLR PRGPQIERLT ENRAKVVLEP LGRGYAHTLG NALRRVLLSS IPGSAITQVE
IDGVLHEYTT VEGLQEDVLE VLLNLKDVAI RIHSGDTATL SLFKQGAGVV TAADIKTDHN
VEIINDGHVI CHLTKDTTIN MRLKVERGFG YQPAVVRRRP DDENRTIGRL ILDASFSPVR
RVAYVVEAAR VEQRTDLDKL IIDIETNGTI DAEEALRTAA DILTDQLSVF GDFTHRDRGT
VKPASSGVDP VLLRPIDDLE LTVRSANCLK AESIYYIGDL IQKTEVELLK TPNLGKKSLT
EIKEVLGQRG LGLGVKLENW PPPGVSQYGM LG
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