| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0514 |
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| Symbol | secY |
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| ID | 6120917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 557412 |
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| End bp | 558785 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641648583 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001775153 |
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| Protein GI | 170729720 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.27475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAC CTAGTCTGGG AAATCTTGGT AATCGCTTCG GTAAGTCGAT CGAGCTTCGT
AATCGGTTGC TTTTTCTTTT TGGCGCTTTA ATTGTTTATA GGGTTGGCTG TTACGTTCCG
GTTCCTGGTG TAAATCCTGA GGCCATGCTC GCTCTGATGC AGAAGCAAGG TGGTGGTATC
GTGGACATGT TTAACATGTT TTCCGGTGGT GCTCTTCATC GCTTTAGCAT TTTTGCATTA
AATGTGATGC CTTACATTTC TGCTTCTATT GTTGTCCAGT TGGCTACTCA TATTTTCCCT
TCCCTGAAAG CAATGCAAAA AGAGGGTGAG TCAGGGCGGC GCAAGATAAC ACAGTATTCG
CGCATTGGTG CTGTTATTCT AGCTGTAATT CAGGGTGGTA GTATCGCATT AGCATTGCAA
AATCAAACAG CTCCTGGCGG CGCTGCTGTG GTATATGCTC CTGGAGCTGC TTTTGTAATG
ATTGCTATTG TTGCTTTGAC TGCAGGAACT GTTTTTCTGA TGTGGGTTGG TGAGCAGGTT
ACGGAGCGAG GTATTGGCAA TGGTGTGTCG ATGATTATTT TTGCAGGTAT CGTTGCTGGC
TTGCCTGGGT CTGTGTTGCA AACAATTGAT GCTTTCCGTA GCGATGCATT GAGTTTGATT
TCCTTATTGA TAATTGTTTT TATTGTTCTA TCATTCACTT TTTTCGTTGT TTTTGTTGAG
CGTGGCTTGC GTAGGATTAC TGTGAACTAT GCTCGACGTG TTGAGGGTCG TAATTCTTAT
ATGAATAAGA GTTCTTTTTT GCCTCTCAAG CTTAATATGG CAGGTGTTAT TCCTCCTATT
TTCGCCTCTA GTATTTTAGC CTTTCCTGTT ACCTTATCAA TGTGGTCTGG GCAAGCTTCT
TCTAATACTG TTTTTGGTGC TTGGTTGCAG CGCGTTGCTA GTGCTTTAGG TCCGGGTGAG
CCTTTGCATA TGATTCTTTT TGCTGTTCTG ATAATAGGCT TTGCTTTTTT TTATACAGCT
CTTGTGTTTA GTTCGCAGGA AACTGCTGAT ATTCTTAAAA AGTCTGGCGC ATTGATTCCT
GGAATCAGGC CTGGTAAGGC TACTTCCGAT TACGTTGATG GGGTTTTGAC TCGTTTGACT
GCGGTAGGAT CTTTGTACTT AGTTATTGTA TGTTTGTTGC CAGAATTCAT GCAGTCCAGG
ATGGGCGCTT CCTTTCATTT CGGTGGTACT TCTTTGCTGA TTGCTGTTGT CGTTGTTATG
GATTTTATTT CTCAAATACA AGTTCATCAA GCCTCTAACC AATATGATGG TGTGAGTTTT
TTTAAGAAAG CTAATTTGAA AGGTGTTTCA AAAAAGCGTC GCTTTGTGAA TTAA
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| Protein sequence | MSQPSLGNLG NRFGKSIELR NRLLFLFGAL IVYRVGCYVP VPGVNPEAML ALMQKQGGGI
VDMFNMFSGG ALHRFSIFAL NVMPYISASI VVQLATHIFP SLKAMQKEGE SGRRKITQYS
RIGAVILAVI QGGSIALALQ NQTAPGGAAV VYAPGAAFVM IAIVALTAGT VFLMWVGEQV
TERGIGNGVS MIIFAGIVAG LPGSVLQTID AFRSDALSLI SLLIIVFIVL SFTFFVVFVE
RGLRRITVNY ARRVEGRNSY MNKSSFLPLK LNMAGVIPPI FASSILAFPV TLSMWSGQAS
SNTVFGAWLQ RVASALGPGE PLHMILFAVL IIGFAFFYTA LVFSSQETAD ILKKSGALIP
GIRPGKATSD YVDGVLTRLT AVGSLYLVIV CLLPEFMQSR MGASFHFGGT SLLIAVVVVM
DFISQIQVHQ ASNQYDGVSF FKKANLKGVS KKRRFVN
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