Gene Xfasm12_0513 details

Gene Information

• Locus tag: Xfasm12_0513
• Symbol: rplO
• ID: 6120916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 556961
• End bp: 557404
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641648582
• Product: 50S ribosomal protein L15
• Protein accession: YP_001775152
• Protein GI: 170729719
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.155544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCTTC GTCTAAATGA TTTAAAGCCC GCCTTGGGTG CTAGTTCTTC CCGTGCTCGG 
GTTGGTCGCG GTATTGGTTC TGGTTTGGGT AAAACAGCAG GTCGCGGCCA CAAAGGGTCT 
TTTGCTCGTA AGGGTGGTGG TAAGATCAAG CCTGGTTTCG AAGGGGGGCA GACTCCAATG 
CAGCGTCGTT TACCTAAGAT CGGTTTTCGT TCCAGATCAG TTGCTAATAC TGCCGAAGTG 
CTTTCTTATA AATTGGATAA TTTAGAACCA GGTGAGATTG ATTTTGCTTC CTTGCGTTTG 
GCGAAATTGG TCCCTTCCAC TGCGAAGAAG GCGAAAATCG TTAAAAAAGG TAGATTGACC 
AAAGTATTTG TATTAAAGGG TATAGAATCA ACTGCAGGTG CTAGGGCTAT GATTGAAACT 
ACTGGTGGTA GCTTCCAGGA GTAA 

 

Protein sequence

MSLRLNDLKP ALGASSSRAR VGRGIGSGLG KTAGRGHKGS FARKGGGKIK PGFEGGQTPM 
QRRLPKIGFR SRSVANTAEV LSYKLDNLEP GEIDFASLRL AKLVPSTAKK AKIVKKGRLT 
KVFVLKGIES TAGARAMIET TGGSFQE