| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0500 |
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| Symbol | rpsC |
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| ID | 6120903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 551315 |
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| End bp | 552034 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641648569 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001775139 |
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| Protein GI | 170729706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0181082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGCATA AAGTTCATCC GATTGGAATT CGTCTGGGTA TATCTGCAGA TTGGAATTCC
AAGTGGTACG CAAATAAGGC TGAATTTGCG GGATATTTGG CCGCAGATCT TAAAGTGCGC
CAAGTGTTAC GTAAAAAAAT GTCTCAGGCT GGTATCAGTA AAATACTTAT TGAGCGTCCT
TCTAATGCTG CTTGTGTTAG CATGCATGTT GCTCGCCCTG GTGTAGTTAT TGGTAAGCGC
GGTGAAGATA TTGAAATGTT GAGAAAGCAA CTCAGTGATA TTATGGGCGT TTCCGTCCAT
ATCAATGTCA TTGAAGTACG TAAACCTGAG CTTGATGCAC AGTTGGTCGC TGAATCGGTC
GCTCAACAGT TAGAACGTAG GATTATGTTT CGTCGTGCTA TGAAGCGTTC GGTTAGCAAT
GCGATACGCT TGGGTGCTTT AGGGATAAAG ATTAGTGTTG CTGGACGTCT TAATGGCGCT
GAGATTGCTC GATCTGAATG GTACCGTGAA GGTCGTGTCC CATTGCAAAC TTTGCGTGCT
GATATAGGTT ATGGTTTTTC TGAAGCGCAT ACGAACTATG GTGTTACTGG TGTCAAGGTT
TTGATATATC ATGGAGATAT TTTCAGTTTT TCCAGTGTGG GTCAGGAAAA GCAGGATGAT
GGTTCGCGCG GTGATCGTAA TGCTGACCGT TCATCTCGTC GTTCCCGTGA GGTGAGGTGA
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| Protein sequence | MGHKVHPIGI RLGISADWNS KWYANKAEFA GYLAADLKVR QVLRKKMSQA GISKILIERP
SNAACVSMHV ARPGVVIGKR GEDIEMLRKQ LSDIMGVSVH INVIEVRKPE LDAQLVAESV
AQQLERRIMF RRAMKRSVSN AIRLGALGIK ISVAGRLNGA EIARSEWYRE GRVPLQTLRA
DIGYGFSEAH TNYGVTGVKV LIYHGDIFSF SSVGQEKQDD GSRGDRNADR SSRRSREVR
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