| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0499 |
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| Symbol | rplV |
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| ID | 6120902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 550955 |
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| End bp | 551296 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641648568 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001775138 |
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| Protein GI | 170729705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00322381 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATGG AAGCGACTGC TATATTGCGT GGTGCGCGTA TTTCTCCGCA AAAGGCTCGT
TTGGTTGCCG CTCAAGTTCG CGGTTTATCT GCTGAGTCTG CTGTTAATCT CTTGAGATTT
TCGAGTAAGA AGGCCGCTTG CCTGATTAAG AAGGTGGTTG AGTCTGCTAT TGCTAATGCA
GAAAACAATC ACGGTTCTAA CATTGATGAT TTGAAGATCA ATACCATAAT CGTTGATGAG
GGCAGAATGC TGAAACGTTT CATGGCACGT GCCAAGGGGC GTAGTTCTCG CATTGTTAAA
CGTAGTAGTC ATATTACCGT AGTTGTCGGC CCTGCCAAGT AA
|
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| Protein sequence | MNMEATAILR GARISPQKAR LVAAQVRGLS AESAVNLLRF SSKKAACLIK KVVESAIANA
ENNHGSNIDD LKINTIIVDE GRMLKRFMAR AKGRSSRIVK RSSHITVVVG PAK
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