| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0488 |
|---|
| Symbol | |
|---|
| ID | 6120891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 543909 |
|---|
| End bp | 544436 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641648557 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001775127 |
|---|
| Protein GI | 170729694 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.168229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG CCCTTACGCT GGCTCGTCCT TACGCTCGTG CAGCGTTCGC CATAGCCTGT
GAAAAAGGTA AGTGTATGCA GTGGTCACAA GCGTTAACAT TCTCCGCGCA AGTCGCAAAC
AATCCCATTG CGGCTACGTT GCTTTCCCAT CCACAACTAG ATCATGAACA AGCCGCAGCA
CTACTGTCAC CCGAAGGAGC GGATCCAGCT TATGTCCGCT TTCTAGAGGT AATCGCCGAA
GCACATCGAC TTGATGTATT ACTACAGGTT GCAGGCTTGT ATGAAAAATT ACGCGCCGAA
GCCGAGCATG TCATCAAAGC TAAGATCACA TCTGCCATTG AGCTTGCGCC AAATGAACTA
AACAACATTG TCACCGCACT GAAAAAACGC TTTGACTGCG AGATTGAGGT CACCACTGGT
GTTGACCACT CACTGATCGG TGGTGCAGTG ATCGACACTG GTAACGTAGT CATCGACGGC
TCGATCAAAA GCAAGCTCAC ACGCTTACAG GCCTCGCTGA CCCACTGA
|
|---|
| Protein sequence | MSQALTLARP YARAAFAIAC EKGKCMQWSQ ALTFSAQVAN NPIAATLLSH PQLDHEQAAA
LLSPEGADPA YVRFLEVIAE AHRLDVLLQV AGLYEKLRAE AEHVIKAKIT SAIELAPNEL
NNIVTALKKR FDCEIEVTTG VDHSLIGGAV IDTGNVVIDG SIKSKLTRLQ ASLTH
|
|---|
| |