Gene Xfasm12_0484 details

Gene Information

• Locus tag: Xfasm12_0484
• Symbol: atpC
• ID: 6119548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 539372
• End bp: 539803
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641648553
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001775123
• Protein GI: 170729690
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATCCA TGAGCACTAT CCGTTGTGAC ATAGTCAGCG CTGAGCAAGA GATCTTTCAT 
GGTGAAGCCA CCTTTGTCGT GGCCACAGGA GAACTTGGCG AACTGGGAAT TGCCCCAAAA 
CATGCACCAC TGATCACTCG TCTGAAACCT GGCAAAGTAG TCATTACCAC TGTAAACGGC 
GAACAACTCG ACTTCGCCAT TTCTGGTGGC ATCCTAGAGG TACAACCGCA AGTCGTCACG 
ATTTTGGCAG ACTCAGCAAT ACGTGCGGAC ACAATTGACG AAGTGGCCGT ACGTAAAGCA 
AAGGAAGAAG CCGAACGCAT CCTGGCCAAT CGTGGCGAAA CGATTGACGT AGCTAAAGCA 
CAACAACAAT TAGTTGAAGC TGTCGTGCAG ATGCAAGCAT TGGAACGCCT CCGCCGCACA 
GTCAAACACT GA 

 

Protein sequence

MASMSTIRCD IVSAEQEIFH GEATFVVATG ELGELGIAPK HAPLITRLKP GKVVITTVNG 
EQLDFAISGG ILEVQPQVVT ILADSAIRAD TIDEVAVRKA KEEAERILAN RGETIDVAKA 
QQQLVEAVVQ MQALERLRRT VKH