| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0483 |
|---|
| Symbol | |
|---|
| ID | 6119547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 538550 |
|---|
| End bp | 539125 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641648552 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001775122 |
|---|
| Protein GI | 170729689 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTGT CTTCCCTATT GCGCCACAAC GTACATCTTG CTGCATTCAT CATTAGCCTG
AGCCTTTTCG GGTACACAGA CCAGGCACAC AGCGCCCCCA GTACATTGAC CACCTTGCTG
GGAAAAGTAG CAGAACGCAA CGCGATCGGT GACGAAGTCG CACTCAGCAA ATGGGACACT
GGTAAACCTG TCCTTGATGT CTCACGCGAA ACAGCAGTAT TACAAAGCGT ACGCGACCAA
GCACCGCAGT ACAGATTAGA CCCAGACTTA GCTGCTCGCT TCTTCTCCGC ACAAATTGAG
AGCAACAAAC TAGTGCAGTA TCAACTGCTC AACCGTTGGC AATTACGCGG CAAGGCTCCA
AATCGGACGC GCCCAAACCT TATCGCTCTG CGTGATCGCT TAGATCACCT GCAAAACGAA
CTGCTTGACG CATTAGCACA GAGTATGCGT CTACGTGAAC AGAACAACTG TACATCTGAG
ATTGCCCTTG CCGCCGAAGC CTATGCGCGA CAATTGAACC TAGACAATCT CCATTATCTC
GCATTAATAC GCAGTCTCGG TGATTTCTGC CACTGA
|
|---|
| Protein sequence | MSLSSLLRHN VHLAAFIISL SLFGYTDQAH SAPSTLTTLL GKVAERNAIG DEVALSKWDT
GKPVLDVSRE TAVLQSVRDQ APQYRLDPDL AARFFSAQIE SNKLVQYQLL NRWQLRGKAP
NRTRPNLIAL RDRLDHLQNE LLDALAQSMR LREQNNCTSE IALAAEAYAR QLNLDNLHYL
ALIRSLGDFC H
|
|---|
| |