Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0472 |
Symbol | |
ID | 6119536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 527492 |
End bp | 528949 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641648542 |
Product | TldD protein |
Protein accession | YP_001775112 |
Protein GI | 170729679 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0623925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CCGCACTCTC TGTCGCCGAA TCCCGGCTGT TGTTGCCTGC CGGTCTGGAT GACGGCCAAA TTGATTCTAT TTTCGGAACG TTACTCGGAC CTGGGGTCGA TTTTGGCGAC CTGTATTTCC AGCACGCGCG TCGTGAGAGT TGGAGTATAG AGGACGGTAT TGTCAAGGAT GGAACGCACT CGATTGAACA GGGTGTCGGG GTGCGTGCTA TTTCTGGTGA GAAGACCGGT TTTGCTTATT CCGATGACAT TAACCGGGAT GCGTTGCTTG AGGCGGCGTA TGCGGCGCGT GCGATTTCGC GTTCACCTGG TGATGGGGTG CAGGGGACAC ATGCGGTGTT GCGCCGTCAT GGGCGGGAGC TGTGTTTGTA TCCGGCATTG GATCCGGTGG GTGGGATGGA TAATGCTGAG AAGATTGCGG TGATGCGGCG TGTCGATCAG TTATTGCGTG CGGCTGATCC GCGTGTCACT CAGGTGATGA TTAATTTGTC TGGTGGTGTC GATGTGGTGT TGATTGCACG CAGTGATGGT GTGCTCGCTG CGGATGTGCG CCCGTTGGTG CGATTGAATG TGCAGGTGAT CGTTGAGGGT CATGGTCGCC GTGAATCTGG CTATGCCGGT GGTGGCGGGC GTTATGGATA TGCTGAGTTG TTTGCCGATG GCCGCCCGGA GGCTTTTGCA CGGGAGGCGC TTCGCCAAGC GTTGGTGAAT CTTGAGGCGA TTCCGGCTCC GGCTGGTGTG ATGCCGGTGG TGCTTGGTGC TGGTTGGCCT GGTGTGTTGT TGCACGAGGC GGTGGGCCAT GGTCTTGAGG GTGATTTCAA CCGTAAGGCT ACCAGTGTTT ATGCCGGTCG TATTGGTGAG CGCGTCGCGT CACCAGGGGT GACGATTGTT GATGATGGGA CGCTGGATGG TCGTCGTGGT TCGCTCAATA TTGATGACGA AGGGACGCCT ACGCAATGCA CCACATTGAT TGAAGACGGT GTGTTGGTTG GTTATATGCA GGATACGTTG AATGCTCGGT TGATGGGAGT GGCATCGACT GGTAATGGTC GCCGTGAGTC GTTTGCGCAC TTGACGATGC CACGCATGAC CAATACGTAT ATGCGTGCTG GTGCACATAG TCGTGAGGAG ATGATCCGTT CGGTCAAGAA GGGACTGTAT GCGGTCAATT TCGGGGGGGG GCAGGTCGAC ATTACCAGCG GCAAGTACGT GTTTTCGGCG ACGGAAGCTT ATTTGATTGA GGATGGCCGG GTGACTGCTC CGATTAAGGG GGCTACGCTG ATTGGCAATG GTCCTGAGAC GATGCAGCGG GTGCGCATGA TTGGGGATGA TTTGGCGTTG GATGCGGGGG TCGGGGTCTG TGGCAAAGAT GGGCAGAGTG TGCCCGTCGG TGTCGGCCAA CCGTCGTTAC TCATTGATGG GTTGACGGTG GGGGGGACTC AGGCATGA
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Protein sequence | MKNTALSVAE SRLLLPAGLD DGQIDSIFGT LLGPGVDFGD LYFQHARRES WSIEDGIVKD GTHSIEQGVG VRAISGEKTG FAYSDDINRD ALLEAAYAAR AISRSPGDGV QGTHAVLRRH GRELCLYPAL DPVGGMDNAE KIAVMRRVDQ LLRAADPRVT QVMINLSGGV DVVLIARSDG VLAADVRPLV RLNVQVIVEG HGRRESGYAG GGGRYGYAEL FADGRPEAFA REALRQALVN LEAIPAPAGV MPVVLGAGWP GVLLHEAVGH GLEGDFNRKA TSVYAGRIGE RVASPGVTIV DDGTLDGRRG SLNIDDEGTP TQCTTLIEDG VLVGYMQDTL NARLMGVAST GNGRRESFAH LTMPRMTNTY MRAGAHSREE MIRSVKKGLY AVNFGGGQVD ITSGKYVFSA TEAYLIEDGR VTAPIKGATL IGNGPETMQR VRMIGDDLAL DAGVGVCGKD GQSVPVGVGQ PSLLIDGLTV GGTQA
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