Gene Xfasm12_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0470 
Symbol 
ID6119534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp521902 
End bp523395 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content52% 
IMG OID641648540 
Productribonuclease G (cytoplasmic axial filament protein) 
Protein accessionYP_001775110 
Protein GI170729677 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0285908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGG AGATCTTAGT TAACGTGACT TTTGGTGAAA CGCGTGTGGC AGTCGTTGAA 
AACGGTTTGC TTCAGGAGTT GCACATTGAG CGCGATGGGT GTCGTGGTGT GGTTGGGAAT
ATCTACAAAG GTAGGGTGCA GCGCGTCATG CCTGGGATGC AGGCGGCTTT TGTTGATGTG
GGAATGGAAC GTACCGCTTT TCTACACGTT AACGATGTGG TGCGGTCTGC GCCTGCTGAT
TCCAGTGTGA TTGATACTGA TGAAACGACA GTGCCGCCTT TATCTGAGAT ACCAATTGTT
GAGTTACTGC GTGATGGGCA GGAGTTGATG GTTCAGGTGC TTAAGGAGCC GATCGGTACG
AAAGGTGCGC GTTTGACCAC TCAGATCAGC ATTCCTTCGC GTTATTTAGT GTTGCTGCCG
CAGTCTAAGA TGGTTGGGGT TTCGCTCCGG ATTGAAGATG AAGCAGAGCG TGCACGGTTG
AAAGCAGTCG TGACGGATCT GGCGGCGCAG TACGGTGATT ACGGTTATAT CGTCCGTACC
AATGCTGAGG GCCAGTCTGC TGATGTGCTT GTTGAGGATA TTGCCTATTT GTCGCGGTTG
TGGGGTGTGG TGGAGCGGCG TGGGCGTGAA TTGCCTGTGT GCAGTCTCCT CTATGAGGAT
TTGAGTCTTT CGTTGCGTTC GGTGCGTGAT CTAATCCGTA AAGATGTGGA AAAGATCAAG
GTGGACTCGA AGGAGGCTTT CGCCCAGTTG CAGGGATTTG TGACGAAATA TATGCCGGTG
CTGGCGGATA AGTTGGAGTT GTATGTCGGC GATCATCCGA TTTTCGATCT TTATGGTGTG
GAGGATGAGA TCGGTCGCGC TTTGGATAGA CAAATCCCTC TTAAATCAGG GGGGTATCTT
GTCATTGAGC AAACTGAGGC GATGACCACG GTGGATGTGA ATACCGGTTC GTTTGTCGGT
AAGCGTACTC TGGAGGAGAC GGTGTTTCGT ACTAATCTGG AGGCGGCGCA GGCGTTGGCA
CGTCAACTGC GGTTGCGTAA TCTTGGCGGG ATTATCGTCA TTGATTTTAT CGACATGCAA
GACGCCGAAC ACCGTTGCCA AGTGTTGCGT GTGTTGGAGA AAGCATTGAT ACGTGACCAT
GCCAAGACCA AGGTGTACGA TTTTTCACCG CTGGGTTTGG TTGAGATGAC GCGCAAGCGT
ACTGTGGAAA GTTTGCAGCG GCAGTTGTCT GAGACGTGCC AGGAATGTGG GGGACGTGGC
ACGATCAAAA CGGCCGAGAC GGTGACCTAC GAGATATTCC GTGATATCAC CCGTGCAGTG
CGTCAGTTCG ATGCGGTGCG GTTGTTGGTG ATTGCCTCAC CCAATGTGGT GTCCAGGATG
ACGGATGAGG AGTCTGCTGC AGTTGCTGAG TTGGAGGCGG TGCTTGGCAA AGCGATTCGG
TTTCAGGCTG ATCCGCACTA TTTGCAGGAG CAGTATGAGG TGGTGTTGTT GTGA
 
Protein sequence
MSEEILVNVT FGETRVAVVE NGLLQELHIE RDGCRGVVGN IYKGRVQRVM PGMQAAFVDV 
GMERTAFLHV NDVVRSAPAD SSVIDTDETT VPPLSEIPIV ELLRDGQELM VQVLKEPIGT
KGARLTTQIS IPSRYLVLLP QSKMVGVSLR IEDEAERARL KAVVTDLAAQ YGDYGYIVRT
NAEGQSADVL VEDIAYLSRL WGVVERRGRE LPVCSLLYED LSLSLRSVRD LIRKDVEKIK
VDSKEAFAQL QGFVTKYMPV LADKLELYVG DHPIFDLYGV EDEIGRALDR QIPLKSGGYL
VIEQTEAMTT VDVNTGSFVG KRTLEETVFR TNLEAAQALA RQLRLRNLGG IIVIDFIDMQ
DAEHRCQVLR VLEKALIRDH AKTKVYDFSP LGLVEMTRKR TVESLQRQLS ETCQECGGRG
TIKTAETVTY EIFRDITRAV RQFDAVRLLV IASPNVVSRM TDEESAAVAE LEAVLGKAIR
FQADPHYLQE QYEVVLL