Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0457 |
Symbol | lysS |
ID | 6119520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 505575 |
End bp | 507095 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648527 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001775098 |
Protein GI | 170729665 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAGC ATCTCCCTGC GTCGCAGGTG TCCTTTGACG AGAACGCGCT GATTGCCGAG CGCCGTGCAA AACTTTTAGC ACTACGTGCG CAAGGCGTGG TTTATCCGAA TGATGTCAAA CGCGAGCATT ATGCTGCTGA TGTGCAGGCA GCATTTGCCA ACGTCGAGAC ATGGACTGCT GAGACCCTGG AGGCGTCAAG CCATCGTGTA CGTATGGCTG GCCGATTGAT GGCTAAGCGT CTCATGGGCA AGGCCAGCTT TGCTCAGATT CAGGACGAGT CTGGCCGCAT CCAGCTGTTA ATACAGAGTA ACGTGCTTGG TGAGGACAGC TATGCCGCAT TCAAGGTGTT GGATGTTGGC GACATCATTG CTGTTGAAGG AGGATTGACC CGCACCAGAA CGGGCGAGCT GTCGGTCAAG GTGAATGTCT TGCGACTTTT GACGAAGGCG TTACGTCCAT TGCCTGACAA GTGGCACGGG CTGACTGATG TGGAGCAGCG CTACCGCCAG CGCTATGTTG ATCTTATTGT GACTCCAGAA TCGCGTGAGA TCTTCATCAA ACGCTCCAAG ATCATTCGTG CGCTGCGTAC TTGGCTGGAT GCGCGTCTTT TCTTGGAAGT AGAGACGCCG ATGATGCATT ACATCCCAGG AGGTGCTGCG GCTAAGCCGT TTGTGACCTA CCACAATGCC TTGGATTTAG AGTTATATCT GCGCGTGGCC CCAGAGTTGT ATCTCAAGCG TTTGGTCGTG GGTGGGCTGG AACGGGTTTA CGAGATTAAC CGCAACTTCC GTAACGAGGG GGTGTCGACC CGGCACAACC CCGAATTTAC GATGCTTGAG TTATACGAGG CCTATTCCAC CTACCATGAG GTCATGGATC TGGCTGAGAC GATGATCCGT GATACTGCAC AGTCTGTGTT GGGCACGACC CAGGTGATTT GGGACGGTGC TCAGATTGAT CTGGGTCCGA TATTCCGGCG TTGGCGCATG GATGAGGCAG TTTGCCATCA TAATCCTGAG ATCAGCGTTG CCGAGTGTAC CGATCGTGAT GCATTGCTCC TTCACTGTGA GAGACTCAAG ATCAAGGTTA AATCGTCCTA CGGTTGGGGT CGATTGCTCT TGAGTATTTT TGAGGCGACT GTCGAGCATA CGTTGATCCA GCCGACCTTC ATTACGGATC ATCCGGTTGA AATCTCTCCT TTAGCGCGCG AAAGCGACAT CGAATCAGGG TATACCGATC GCTTCGAACT GTTCATCAAT GGGAAGGAAA TCGCCAACGG TTTCTCGGAA TTGAACGATC CGGAGGAGCA GGCGATGCGC TTCCAAAAGC AGGTTGAAGC CAAAGAAGGG GGGGATGATG AGGCCATGTA CTACGATGCC GACTATATTC GCGCTTTGGA GTATGGGATG GCGCCAACCG GAGGGTTAGG GATTGGTGTT GATCGACTGG TGATGCTGCT GACCGGTAGC ACCTCGATCC GCGATGTGCT GTTATTCCCT TATATGCGTC CAGAACGTTA A
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Protein sequence | MTEHLPASQV SFDENALIAE RRAKLLALRA QGVVYPNDVK REHYAADVQA AFANVETWTA ETLEASSHRV RMAGRLMAKR LMGKASFAQI QDESGRIQLL IQSNVLGEDS YAAFKVLDVG DIIAVEGGLT RTRTGELSVK VNVLRLLTKA LRPLPDKWHG LTDVEQRYRQ RYVDLIVTPE SREIFIKRSK IIRALRTWLD ARLFLEVETP MMHYIPGGAA AKPFVTYHNA LDLELYLRVA PELYLKRLVV GGLERVYEIN RNFRNEGVST RHNPEFTMLE LYEAYSTYHE VMDLAETMIR DTAQSVLGTT QVIWDGAQID LGPIFRRWRM DEAVCHHNPE ISVAECTDRD ALLLHCERLK IKVKSSYGWG RLLLSIFEAT VEHTLIQPTF ITDHPVEISP LARESDIESG YTDRFELFIN GKEIANGFSE LNDPEEQAMR FQKQVEAKEG GDDEAMYYDA DYIRALEYGM APTGGLGIGV DRLVMLLTGS TSIRDVLLFP YMRPER
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