Gene Xfasm12_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0457 
SymbollysS 
ID6119520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp505575 
End bp507095 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content53% 
IMG OID641648527 
Productlysyl-tRNA synthetase 
Protein accessionYP_001775098 
Protein GI170729665 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGC ATCTCCCTGC GTCGCAGGTG TCCTTTGACG AGAACGCGCT GATTGCCGAG 
CGCCGTGCAA AACTTTTAGC ACTACGTGCG CAAGGCGTGG TTTATCCGAA TGATGTCAAA
CGCGAGCATT ATGCTGCTGA TGTGCAGGCA GCATTTGCCA ACGTCGAGAC ATGGACTGCT
GAGACCCTGG AGGCGTCAAG CCATCGTGTA CGTATGGCTG GCCGATTGAT GGCTAAGCGT
CTCATGGGCA AGGCCAGCTT TGCTCAGATT CAGGACGAGT CTGGCCGCAT CCAGCTGTTA
ATACAGAGTA ACGTGCTTGG TGAGGACAGC TATGCCGCAT TCAAGGTGTT GGATGTTGGC
GACATCATTG CTGTTGAAGG AGGATTGACC CGCACCAGAA CGGGCGAGCT GTCGGTCAAG
GTGAATGTCT TGCGACTTTT GACGAAGGCG TTACGTCCAT TGCCTGACAA GTGGCACGGG
CTGACTGATG TGGAGCAGCG CTACCGCCAG CGCTATGTTG ATCTTATTGT GACTCCAGAA
TCGCGTGAGA TCTTCATCAA ACGCTCCAAG ATCATTCGTG CGCTGCGTAC TTGGCTGGAT
GCGCGTCTTT TCTTGGAAGT AGAGACGCCG ATGATGCATT ACATCCCAGG AGGTGCTGCG
GCTAAGCCGT TTGTGACCTA CCACAATGCC TTGGATTTAG AGTTATATCT GCGCGTGGCC
CCAGAGTTGT ATCTCAAGCG TTTGGTCGTG GGTGGGCTGG AACGGGTTTA CGAGATTAAC
CGCAACTTCC GTAACGAGGG GGTGTCGACC CGGCACAACC CCGAATTTAC GATGCTTGAG
TTATACGAGG CCTATTCCAC CTACCATGAG GTCATGGATC TGGCTGAGAC GATGATCCGT
GATACTGCAC AGTCTGTGTT GGGCACGACC CAGGTGATTT GGGACGGTGC TCAGATTGAT
CTGGGTCCGA TATTCCGGCG TTGGCGCATG GATGAGGCAG TTTGCCATCA TAATCCTGAG
ATCAGCGTTG CCGAGTGTAC CGATCGTGAT GCATTGCTCC TTCACTGTGA GAGACTCAAG
ATCAAGGTTA AATCGTCCTA CGGTTGGGGT CGATTGCTCT TGAGTATTTT TGAGGCGACT
GTCGAGCATA CGTTGATCCA GCCGACCTTC ATTACGGATC ATCCGGTTGA AATCTCTCCT
TTAGCGCGCG AAAGCGACAT CGAATCAGGG TATACCGATC GCTTCGAACT GTTCATCAAT
GGGAAGGAAA TCGCCAACGG TTTCTCGGAA TTGAACGATC CGGAGGAGCA GGCGATGCGC
TTCCAAAAGC AGGTTGAAGC CAAAGAAGGG GGGGATGATG AGGCCATGTA CTACGATGCC
GACTATATTC GCGCTTTGGA GTATGGGATG GCGCCAACCG GAGGGTTAGG GATTGGTGTT
GATCGACTGG TGATGCTGCT GACCGGTAGC ACCTCGATCC GCGATGTGCT GTTATTCCCT
TATATGCGTC CAGAACGTTA A
 
Protein sequence
MTEHLPASQV SFDENALIAE RRAKLLALRA QGVVYPNDVK REHYAADVQA AFANVETWTA 
ETLEASSHRV RMAGRLMAKR LMGKASFAQI QDESGRIQLL IQSNVLGEDS YAAFKVLDVG
DIIAVEGGLT RTRTGELSVK VNVLRLLTKA LRPLPDKWHG LTDVEQRYRQ RYVDLIVTPE
SREIFIKRSK IIRALRTWLD ARLFLEVETP MMHYIPGGAA AKPFVTYHNA LDLELYLRVA
PELYLKRLVV GGLERVYEIN RNFRNEGVST RHNPEFTMLE LYEAYSTYHE VMDLAETMIR
DTAQSVLGTT QVIWDGAQID LGPIFRRWRM DEAVCHHNPE ISVAECTDRD ALLLHCERLK
IKVKSSYGWG RLLLSIFEAT VEHTLIQPTF ITDHPVEISP LARESDIESG YTDRFELFIN
GKEIANGFSE LNDPEEQAMR FQKQVEAKEG GDDEAMYYDA DYIRALEYGM APTGGLGIGV
DRLVMLLTGS TSIRDVLLFP YMRPER