Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0397 |
Symbol | |
ID | 6119608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 454981 |
End bp | 456159 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641648470 |
Product | contractile tail sheath protein |
Protein accession | YP_001775041 |
Protein GI | 170729608 |
COG category | [R] General function prediction only |
COG ID | [COG3497] Phage tail sheath protein FI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.503837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC ACTATCTACA TGGCGTTGAA GTGCTGGAGA TCGACGATGG CGCACGCGTC ATCCAAACGG CCTCTAGCAG CGTCATTGGC CTGGTGGGTA CTGCACCTCT GGCTGACGCC ACCACCTATC CCCTCAACAC CCCCGTGCTG GTACCGGGAT CCGCCGCGAT GGCGGCCACA CTAGGGACAG CAGGCACCTT GCCCCAGGCC ATGGATAGCA TTTTTGATCA GATTGGCGCG GCAGTGATTG TGGTGCGTAT TGAAGATAGC GTTGATGAAA CCCAGCGACT GTCTCATGCC GTCGGTGGCA TCCACGCCGC CAACGGCACC TATGAAGGCG TCCATGCGCT GCTGGCTGCC GAAAACATCA CCGGCTACAA ACCGCGCCTG CTGATTGCTC CAGGCTTGAC CCACCAGCGC CCAGAACAGA CACAGGCCAA TCCCGTTGTG TCCGAATTGA TCGGCATTGC CGAGCGACTG CGTGCCATCA TCATTGCCGA TGGACCAGGC ACCACTGATG CACAGGCCAT TGCCTATGCC GGGGACTTTG GCAGCAAACG CGTGTTCCTG GTCGATCCGC CTATCACCAC ACTGGGTGCT GATGGCAACA CCACCACCGC CTACAGCAGC GCTGCGGTGG CCGGACTCAT CGCCAAGATA GATAACCGCA ACGGCTGGTG GTGGTCCCCC TCCAATCAAC CCCTCAACGG CATTCTTGGC ACCTCGCGCC CCATTGATTT TGCATTGGGC GATGCCACCA GCCGCGCCAA TCTGCTGAAT GAAAAAAAGA TTGCCACCAT CATTCGTCAT GACGGCTACA GATTATGGGG AAACCGCACC TTATCCAGCG ATCCTAAGTG GACCTACCTC TGCGTGGTCC GCATCGCCGA TATTATCGCC GACAGCTTAC AAGCGGCCCA TCTGTGGGCG GTGGATCGCT CCATTACCAA AACATACGCC AGTGATGTTG AGGAAGGCGT CAATGCCTAT CTGCGACGAC TGAAAAGCCT GGGCGCGATT ATTAATGGCA GATGCTGGGC GGATACAGCA CTCAACACAA AAGACGCCAT CACCGCAGGG CACGTCTATT TTAATTTTGA CTTCACCCCG GCCTATCCCG CCGAACACAT CACCTTCCGT AGTCGACTCA CCAGTGATTA TCTCGTGGAG GTGTTCTAA
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Protein sequence | MTEHYLHGVE VLEIDDGARV IQTASSSVIG LVGTAPLADA TTYPLNTPVL VPGSAAMAAT LGTAGTLPQA MDSIFDQIGA AVIVVRIEDS VDETQRLSHA VGGIHAANGT YEGVHALLAA ENITGYKPRL LIAPGLTHQR PEQTQANPVV SELIGIAERL RAIIIADGPG TTDAQAIAYA GDFGSKRVFL VDPPITTLGA DGNTTTAYSS AAVAGLIAKI DNRNGWWWSP SNQPLNGILG TSRPIDFALG DATSRANLLN EKKIATIIRH DGYRLWGNRT LSSDPKWTYL CVVRIADIIA DSLQAAHLWA VDRSITKTYA SDVEEGVNAY LRRLKSLGAI INGRCWADTA LNTKDAITAG HVYFNFDFTP AYPAEHITFR SRLTSDYLVE VF
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