Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0389 |
Symbol | |
ID | 6119600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 446930 |
End bp | 448678 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648462 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001775033 |
Protein GI | 170729600 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTATG CCACGCCCTG GCGGACGTAC CGTCGCTTGC TGTCGTATGC GCGGGAGTAT CGTTGGTTAC TCGTTGTTGC TGCGTGTGGT GCTTTACTTG AGGCAGTTGC TGGTTCTACC TTTCTGGCGT TGATGAAGCC CATCACCAAC GAAACCTTTA TCGAGCGAAA CCGTGAGGTG GCCCTGTGGC TGCCTCTTGG AATTGTCGGT TTGTTTTTGT TACGCGGTAT TGCTGGCTAT ATCACTGATA TGGCGATGGG CCGCGCTGCG CGTAGCATTG CTCGGGATTT TCGTGTGTGT GTCCTGACCA AATATTTTCG TTTGCCTGGT GGCCGTTTTG ACGGTGAGCC AGTGGCTTCG ATGTTGGTGC GGCTCGGTTC AGACAGTGAG CAAGTTGCGC ATGCGGTTAT CGACGCGATG AAGGTGATGG TGCAGCAGAC GCTTCAGGTG ATTGGTGCGT TGGTTGTGAT GTTGTGGTAC AGCTGGACAG TCACGCTCGC CATCCTTTTG GTCGCTCCGT TGCTGGCTTG GGTCATGCAG CGGGTTGCTA AGCGTTACCG TCGTATCAGC CATCACATCC AAGAGAGTAA TGCGCAGCTC ATGCAAGCTG CCGATCAAGC GTTAAGCAAC TACCAGGACG TTAAAGTGTA TGCCGCGCAA GAGAGCGAGT TGGAGCGCTA TGCTCGGTTG GCCAATATCA ATTTGGGTTT GGCGATAAAG GTTGAGTCGA CACGTAGTAT CTCTTCGGCG GCGGTTCAGT TGCTTGGTGC GGTTGGGTTG GCAATGTTGT TGCTCATTGC TGGCCATGAA GCTTTGGCCG GTCGCCTCAG TCCAGGCGAT TTTGTCTCGC TGATGACTTC AATGATCGCG GTTATTCCCG CGTTGAAACA GTTGACCAAT GTACAGAACA TGTTGCAGAG CGGTATTGCT TCTGCACAAC GTCTGTTCTC GGTACTAGAT AGTCCTGATG AGCTTGATAC TGGCAGACGA CCGTTGGGGC GTGCCAGAGG ATTAATCGAG TTCCGCGGGA TCACCGCACG CTATCCTGGT CGGTCTGCTC CCGTGCTGGA TAGTGTCAGC TTTGTTGCTG CACCGGGCAC GGTCACTGCG ATTGTTGGTC GTTCAGGAAG CGGTAAGTCA AGTTTAATCA AGTTGATTCC GCGTTTTTAC GAGCCGGAGT CTGGGCAGAT ATTGTTGGAT GGCCATCCAT TACAGGATTA TCTTTTAGCT GATCTGCGCC GTCAGATTGC ATTGGTAGGA CAGCAGGTCA TGTTGTTCGA TGGCAGCATC GCGGAAAATA TTGCTTATGG TGAGATGCAT CAGGTCGTTT CTGAGCAGAT TGAACGTGTC GTGGTTGATG CAAACGCTCA GGATTTTGTG AATCAACTTC CAGAGGGATT ACAGTTTCAG GTTGGGGTTA AGGGGGGGCG TCTTTCTGGG GGACAACGTC AGCGTTTGGC CATTGCGCGC GCGATGCTGA AGGATGCGCC GATTCTTATC CTGGACGAGG CCACGGCTGC GCTTGATAAC GAATCTGAGC GCTTAGTGCA GGATGCGTTG CAGCGCTTGA TGCCGGAGCG CACCACACTT GTGATTGCGC ATCGACTGTC AACGATCAAG CATGCGGATC AGGTGTTGGT GATGGACCAG GGGCGCATCA TTGAGTCTGG TACCCATGTC GATCTGTTGG CACGTGATGG GTTGTACGCT TATTTGTACA GCATGCAATT TCGCGAACGT CCAACATGA
|
Protein sequence | MRYATPWRTY RRLLSYAREY RWLLVVAACG ALLEAVAGST FLALMKPITN ETFIERNREV ALWLPLGIVG LFLLRGIAGY ITDMAMGRAA RSIARDFRVC VLTKYFRLPG GRFDGEPVAS MLVRLGSDSE QVAHAVIDAM KVMVQQTLQV IGALVVMLWY SWTVTLAILL VAPLLAWVMQ RVAKRYRRIS HHIQESNAQL MQAADQALSN YQDVKVYAAQ ESELERYARL ANINLGLAIK VESTRSISSA AVQLLGAVGL AMLLLIAGHE ALAGRLSPGD FVSLMTSMIA VIPALKQLTN VQNMLQSGIA SAQRLFSVLD SPDELDTGRR PLGRARGLIE FRGITARYPG RSAPVLDSVS FVAAPGTVTA IVGRSGSGKS SLIKLIPRFY EPESGQILLD GHPLQDYLLA DLRRQIALVG QQVMLFDGSI AENIAYGEMH QVVSEQIERV VVDANAQDFV NQLPEGLQFQ VGVKGGRLSG GQRQRLAIAR AMLKDAPILI LDEATAALDN ESERLVQDAL QRLMPERTTL VIAHRLSTIK HADQVLVMDQ GRIIESGTHV DLLARDGLYA YLYSMQFRER PT
|
| |