Gene Xfasm12_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0387 
Symbol 
ID6119598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp445808 
End bp446470 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID641648460 
Productbiopolymer transport protein 
Protein accessionYP_001775031 
Protein GI170729598 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAC TGGTAAAGGC TGGCGGCTGG CCGATGTTGC CGCTGTTGAT GTTAGGTGTT 
GTTGCATTGG CGATTGTGCT TGAAAGGCTG TGGACTCTGC GTCGTAATGA GGTATTGCCG 
TCGGGGCTGG GTCGGGAGGT TCGTGAGTGG GTGAGGCGTG GCAAATTGGA CCAAAATCAT 
CTTGAGTCTC TGCGCCGTAA TTCTCCGCTT GGTGCGCTAT TGGCCGCCGC TTTGGATGTA 
AAAGGTGGCG TACGTGAAAT GATTCGTGAA CGTATTGAGG ATACAGGACG CCATCTGGTG 
CATCGCATGG AGCGTTTTCT GAATGCACTC GGTACGATTG CTTCTGCAGG TCCTTTACTT 
GGTTTGCTAG GTACTGTGGT CGGTATGATT CAAATGTTCC TGGGGATTCT CGATTATGGC 
GTGGGCGATG TGAATCAGCT TGCTGGAGGG ATTGGCAAGG CATTGGTTTG CACTGCTACA 
GGTATGATTA TTGCGATTCC CGCTCTGATT TTTCATCGTT ATTTCAAGGG GCGAATTACT 
GGCTATGTGA TTGAGATGGA GCAAGAGGCA ATGCTCTTGC TGGATGCGAT TGATGGTCTT 
CAGATTGCTA TTCAAGGAAG AAATGCCGAA GTGGCGCACC CCAATGCTGT CACCAAGGAT 
TGA
 
Protein sequence
MLELVKAGGW PMLPLLMLGV VALAIVLERL WTLRRNEVLP SGLGREVREW VRRGKLDQNH 
LESLRRNSPL GALLAAALDV KGGVREMIRE RIEDTGRHLV HRMERFLNAL GTIASAGPLL 
GLLGTVVGMI QMFLGILDYG VGDVNQLAGG IGKALVCTAT GMIIAIPALI FHRYFKGRIT 
GYVIEMEQEA MLLLDAIDGL QIAIQGRNAE VAHPNAVTKD