| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0380 |
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| Symbol | sdhA |
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| ID | 6119591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 437648 |
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| End bp | 439438 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648453 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001775024 |
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| Protein GI | 170729591 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTT ATACAATTAC CGAACACAAA TATGACATGG TTGTCGTTGG TGCTGGCGGT
GCTGGTCTAC GTGCCACGTT CGGTTTGGCT CAGAAAGGCT TACAGACTGT CTGTCTGACA
AAAGTATTCC CGACGCGTTC GCATACCGTC GCTGCGCAAG GTGGTATCTC CGCTGCGCTT
GGTAACATGG GAGAGGATGA TTGGCGTTAC CATTTTTATG ACACCATCAA AGGGTCAGAC
TGGCTGGGTG ACCAGGATGC GATTGAGTAC ATGTGCCGTG AGGCAATCCC GGCTGTGATC
GAACTAGAAC ACTATGGTGT TCCGTTCTCG CGTACTGCAC AAGGCAAGAT TTACCAGCGG
CCATTTGGTG GGATGACGAC ACGTTACGGT GAGGGGCCGC GGGCAGAGCG TACCTGCGCT
GCAGCTGATC GAACCGGCCA TGCGATGTTA CATACCTTGT ACCAGCAAGC ATTGGCGCAC
GACGCGCGTT TCATGATTGA GTACTTTGCA CTTGATCTGA TCTTCGACAA CGAGGGTGTG
TGTCGCGGCG TGTTGGCGTT GGACATGGCC GAGGGATCCT TGCACCTGTT TCGTGCCCAT
GGAGTCGTGT TGGCGACAGG TGGCTACGGT CGCACGTACT TCAGTGCAAC TTCTGCTCAT
ACCTGTACTG GTGACGGTGG TGGCTTGGTG ATGCGTGCCG GTTTACCGAT GCAGGATATG
GAGTTTGTGC AGTTCCATCC CACAGGAATC TATGGGGCTG GCTGCCTCAT CACCGAAGGA
GTGCGTGGTG AGGGAGGAAT CTTGCGTAAC TCTAACGGGG AGCGCTTCAT GGAGCGCTAT
GCACCGCACT ACAAGGATCT GGCCTCTCGT GATGTGGTGA GTCGCTCAAT GATTATTGAG
ATCCGGGAGG GGCGCGGCGT TGGTGAACAC AAAGACCATA TATTGCTTGA TTTGACTCAC
TTGGGTCCGA GCATGATCCA AGAAAAATTG CCTGGCATTG CCGAGAGTGC GCGTATCTTC
GCTGGCGTGG ATGTGGCCAA GCAGCCGATT CCGGTGCTGC CAACAGTGCA TTACAACATG
GGTGGTATTC CAACCAATTA CCATGGCGAA GTGGTGCGTA AAGTTGGTAA TGATCCTGAT
GCAGTGGTGC CTGGGCTATA TGCAGTTGGT GAAGCGGCCT GTGTATCGGT GCACGGTGCC
AATCGTTTGG GATCGAATTC GTTGCTTGAT TTGGTGGTAT TCGGTCGTGC GGTTGCCAAT
CGTTGCGCCG AAACAATCAA GCAAAGTCAG CCGCATAAGG TATTGCCGTC GGATAGTTGC
GACAAGGCAC TGGGCTTGCT TGATAAACTT CGCCATGCTG ACGGTTCCAC GCCGACAGCG
GTGATTCGTG ACAGGATGCA ACGTACCATG CAGTCTGATG CTTCGGTGTT TCGTACGAGT
AAGACGTTGC AAGAAGGGTG CGAAAAGATG AATGAAATCT TTGCCTTGTT TGATGACATC
AAGGTTTCTG ATCGTTCACT CGTTTGGAAT TCGGATTTGA TCGAAACCTA CGAGCTGCAC
AATTTGCTGT TAAACGCACT GGCTACGATT AACTCGGCTG AACAGCGCAA AGAGAGCCGT
GGTGCTCATG CGCATGAAGA TTATCCAGAT CGCGATGACG AGAATTGGTT GAAACACACA
TTAGTCAGTG TCGACGAAAA GGGCACATGC AGTTTTGACT ACCGCCCGGT GCACATGTAC
ACGCTCAGCA AAGACGTGGA TGTGATACCT CCTAAGCCGC GCGTCTATTG A
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| Protein sequence | MSAYTITEHK YDMVVVGAGG AGLRATFGLA QKGLQTVCLT KVFPTRSHTV AAQGGISAAL
GNMGEDDWRY HFYDTIKGSD WLGDQDAIEY MCREAIPAVI ELEHYGVPFS RTAQGKIYQR
PFGGMTTRYG EGPRAERTCA AADRTGHAML HTLYQQALAH DARFMIEYFA LDLIFDNEGV
CRGVLALDMA EGSLHLFRAH GVVLATGGYG RTYFSATSAH TCTGDGGGLV MRAGLPMQDM
EFVQFHPTGI YGAGCLITEG VRGEGGILRN SNGERFMERY APHYKDLASR DVVSRSMIIE
IREGRGVGEH KDHILLDLTH LGPSMIQEKL PGIAESARIF AGVDVAKQPI PVLPTVHYNM
GGIPTNYHGE VVRKVGNDPD AVVPGLYAVG EAACVSVHGA NRLGSNSLLD LVVFGRAVAN
RCAETIKQSQ PHKVLPSDSC DKALGLLDKL RHADGSTPTA VIRDRMQRTM QSDASVFRTS
KTLQEGCEKM NEIFALFDDI KVSDRSLVWN SDLIETYELH NLLLNALATI NSAEQRKESR
GAHAHEDYPD RDDENWLKHT LVSVDEKGTC SFDYRPVHMY TLSKDVDVIP PKPRVY
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