| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0371 |
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| Symbol | |
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| ID | 6119582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 428704 |
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| End bp | 430620 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641648444 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001775015 |
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| Protein GI | 170729582 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCAC ATCCCAACAT TCAAGCCGTC ACCGACCATA TCCGCCAACG CAGCGCCACC
ACGCGCACCA ACTACCTCGC CGGGATTGAT GCAGCACTGC GCGACGGACC ATCCCGCAGC
CGCCTAAGCT GCGGCAACCT CGCCCACGGC TTCGCCGCCT GCGGCACGAC TGATAAAGAA
CGTCTACGGG AAGCAATCAC CCCGAACCTA GGCATCATTA CCGCCTACAA CGACATGCTT
TCGGCACACC AACCGTTTGA ACATTACCCA GACATCATCC GTAACACGGC GCGCGCACTG
GGTGCCACCG CACAAGTCGC CGGCAGTGTC CCGGCCATGT GCGATGGTGT CACCCAAGGC
CGTGCAGGCA TGGAACTGTC GCTATTCTCA CGCGACAACA TTGCTCAAAG CACTGCTATC
GGACTCAGCC ACGACATGTT CGACGCAGCA ATCTACTTGG GCGTATGCGA CAAAATCGTC
CCCGGCCTGC TGATCGGCGC ATTGGCATTT GGCCACCTAC CCGCCGCATT CGTCCCTGCA
GGACCCATGC CCTCCGGCAT CCCAAACAAA CAAAAAGCAG AAATACGCGA ACGCTACGCG
GCTGGTCAGG CAACACGTGC TGAACTGCTC GCAGTCGAGG CAGCCTCCTA CCACGCTCCC
GGAACCTGCA CCTTCTATGG CACCGCCAAT TCCAACCAAG TATTGCTGGA AGCAATGGGC
GTGCAATTAC CCGGCGCCTC GTTTGTCTCT CCAGGCACCC CACTGCGTGA GGCACTGACC
CAAGCCGCCA CAGAACGCGT CCTGCACATC ACCGCACTGG GGCAGGATTT CCGCCCGATT
GGGCGATTAA TCGACGAACG CGCCATCGTG AATGCCATCG TCGCCCTCAT GGCTACAGGC
GGCTCAACCA ACCACACCAT CCACTGGATC GCCGTCGCAC GTGCAGCCGG CATCTTGCTA
ACCTGGGACG ATATGGATCG CATCTCCCAA ACCGTACCAC TCCTTGCACG CGTGTATCCC
AACGGTGAAG CCGATGTCAA TCGATTCCAT GCCGCCGGTG GCACTGCCTT TGTGTTCCGT
GAACTGATGG ATGCCGGACT GATGTACGAC GACTTGCCAA CCATCGTCGC AGGCGGCATG
CGGGCCTACA CCCAAGAACC TCACCTACAT CACGGCACAC TCGGCTACAG CCCCTCACCG
ACCACCAGCA CCGACGCATC CGTAGTCCGC CCGGTGACCC ATCCATTCGA ACCCCAAGGA
GGCCTGCGCC TCCTACATGG CAACCTAGGC CGTGCGCTCA TCAAACTGTC GGCGGTTAAA
CCGGAATACC GGGCCATCGA AGCGCCAGCC GTGGTGATCG ACACACCACA GACACTGCAT
AAACTGCATG CCGCAGGTGC ACTCCCCAAA GATTTCATCC TGGTCGTTCG CTATCAAGGA
CCGCGTGCCA ACGGAATGCC AGAACTTCAC TCGCTGGCAC CATTGCTAGG ATTGCTGCAA
AACCAAGGCC GGCGGATCGC CCTGGTCACC GACGGACGTC TCTCCGGCGC CTCGGGCAAA
TTCCCGACGG CGATCCACTT GACCCCAGAA GCAGCACGGG GCGGCCCGAT TGGACGCATC
CGCGAAGGCG ACCTCTTACG CCTTGATGGT GAAGCCGGCA TCTTGGAAGC CCTGGTACCG
ACAACCGAAT GGGAGACGCG CACCCCAGCC CCAAACACAG CAACCACAAG CAACGACCTG
GGGCGCAACC TGTTTGCGAT CAACCGCCAA GTGGTTGGCC CTGCCGACCA AGGCGGACTC
TCGATCTCCT GTGGTCCGGC ACCTCCGGAC AACCACGTGT GGAGCAACAC TGCCAACGAC
ACGCCAGACG ATCACGCCCA CCCTGGCCCC CTGACAGACG AGTCCCAAGA CGCCTGA
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| Protein sequence | MRPHPNIQAV TDHIRQRSAT TRTNYLAGID AALRDGPSRS RLSCGNLAHG FAACGTTDKE
RLREAITPNL GIITAYNDML SAHQPFEHYP DIIRNTARAL GATAQVAGSV PAMCDGVTQG
RAGMELSLFS RDNIAQSTAI GLSHDMFDAA IYLGVCDKIV PGLLIGALAF GHLPAAFVPA
GPMPSGIPNK QKAEIRERYA AGQATRAELL AVEAASYHAP GTCTFYGTAN SNQVLLEAMG
VQLPGASFVS PGTPLREALT QAATERVLHI TALGQDFRPI GRLIDERAIV NAIVALMATG
GSTNHTIHWI AVARAAGILL TWDDMDRISQ TVPLLARVYP NGEADVNRFH AAGGTAFVFR
ELMDAGLMYD DLPTIVAGGM RAYTQEPHLH HGTLGYSPSP TTSTDASVVR PVTHPFEPQG
GLRLLHGNLG RALIKLSAVK PEYRAIEAPA VVIDTPQTLH KLHAAGALPK DFILVVRYQG
PRANGMPELH SLAPLLGLLQ NQGRRIALVT DGRLSGASGK FPTAIHLTPE AARGGPIGRI
REGDLLRLDG EAGILEALVP TTEWETRTPA PNTATTSNDL GRNLFAINRQ VVGPADQGGL
SISCGPAPPD NHVWSNTAND TPDDHAHPGP LTDESQDA
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