Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0370 |
Symbol | |
ID | 6119581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 427948 |
End bp | 428607 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641648443 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_001775014 |
Protein GI | 170729581 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.472958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTA CTGAAACCCA AAACAAAGCC GAATCCCTGT TATACAACGC CGGCATCCTG CCTGTTGTAA CCGTGGACAC AGTGGATCAG GCGCGCCGTG TCGTCAGCGC ACTGCTGGAA GGCGGCCTCA CCACGATCGA ACTGACCTTA CGCACCCCAG TGGCCCTGGA AGCATTAGCA ACTCTCAAGC GCGAACAACC AGAAATCACG ATCGGAGCGG GGACCGTACT CAACGAACAC CAACTCCGCC AATCAATCGA CGCTGGAGCC GACTTTCTTA TCACACCAGG CACCCCTCCC ACCTTGGCAC AGCTGCTAGC CGATGCACCA ATCCCGGCAG TACCGGGTGC GGCCACAGCA ACAGAATTGC TCGCACTCAT GGTGTTGGGC TTCCACGTCT GCAAACTGTT TCCGGCCAAT GTGGTGGGCG GCCTGCACAT GCTCACCAGC TTGGCCGGCC CCCTAACCAA TCTGAAACTA TGCCCCACTG GTGGTATCAA CGAAACCAAT GCTAGCGACT ATCTGGCACA ACCCAACGTC ATCTGCATCG GCGGCTCATG GATGGTTCCC AAAGACTGGC TCGCTCAAGG GCATTGGGAC AACATCAAAA ACACCTCCTC AAAGGCCGCA GCAATCATCC AACAAGCGCG CAACCACTAA
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Protein sequence | MSITETQNKA ESLLYNAGIL PVVTVDTVDQ ARRVVSALLE GGLTTIELTL RTPVALEALA TLKREQPEIT IGAGTVLNEH QLRQSIDAGA DFLITPGTPP TLAQLLADAP IPAVPGAATA TELLALMVLG FHVCKLFPAN VVGGLHMLTS LAGPLTNLKL CPTGGINETN ASDYLAQPNV ICIGGSWMVP KDWLAQGHWD NIKNTSSKAA AIIQQARNH
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