| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0348 |
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| Symbol | |
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| ID | 6119555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 401555 |
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| End bp | 404581 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648421 |
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| Product | hypothetical protein |
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| Protein accession | YP_001774995 |
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| Protein GI | 170729562 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.300848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT CCTGCTCCAG CCAGTTGCTG CAGATACGCC GTTTGCTGTG TTACGCATTA
GCTGTTTGTC TGTACTTGGC ACTGCCGAAT GCATTCGCGC AGAGCAGTAA TGCCACTCTG
CGTGGTCAGG TGAGCCGGGC GCAGGCGGGG GCTGTGGTTT TAGTCACCAA CACCGCCACT
GGTTTGGTGC GCCGGAGTAC GCTCTTATCC GATGGGACTT ACGCGATGAC CGGTCTTCCT
CCTGGGCAGT ACACGATCAG CGTTGGTGGC GTTTCCCGCA CAGTCACGTT GAGTGTGGCT
TCTAGTGTGA CAGTCAATTT GGATGCTGGT GTCCCCATCA GTGGCGATGC GAAGACTTTG
GATGCGGTCC AAGTGACTGG ACAGACGATC CGCGAGGTCA AAACGTCCGA GATCGGCAAT
ACAATCGCCT TACGTCAGAT CCAGCAACTA CCGCAGGCGA CGCGTAACTT CCTGGAGTTT
GCCGATACCG TGCCAGGTAT GGCGTTCAAT ATTGATCCTC AGGGACGCAC CACACTACGC
GCCGGTGCGT CTAATAGTAG CGCCAGTAAT TTGTATATCG ACGGTGTTGG GCAGAAGAGC
TACGTTGCCA AAGGGGGGAT TTCGGGGCAG AACGACAGCC AGGGGAGTCC GTTCCCGCAA
CTAGCGATTG GCGAATACAA AATCATCACT TCCAACTACA AAGCCGAATA TGGTCAGATC
GGTGGCGCGG CGGTCACGGC GGCGACAAAA TCAGGGACCA ATGAATTCCA CGGTGAGACG
TTCTATCGTT ACACCAATCA AAATCTGCGT GACCGGCGGC CAGATGAGGG TGAGACCAAG
GTTGATTCAC AGACCAAAGA ATATGGTTTT GCGCTCGGCG GGCCGATCAT TCGCGACCGT
ATGCATTTTT TCTTTGCCTA TGAAGGCAAG GACAATGTGG TACCACGTAG TGTCCAGGCC
GATGCACGTG CTGCACCTTA TGTGCATTTT CTGCCTTCTT ATCTGTCGCA ACAGTACGGC
GCTGTCAATT TGCCATTTAA CGAGGATCTA TTTTTCGGCA AGATCGATTT TGAGCCAAGC
GGTGATGACC GTTTGGAATT GAGTGTGCAG TATCGCGATG AAACTCAAAT CGATAATATC
GGTGGCCAGA ATGCCGCCGA TCATGGTCTC AATAAGACCA ATAAAGACAA ACGTGGCAGC
TTGCGTTGGC AGCACAGTGC TGATGCTTGG TTCAATGAGC TGATCTTTAC CAGGGAAAAT
GCTAGGAACA ATCCGAATCC GATGAGTATC GGTAATGGGT TTAACTACGT GTATTTGGAC
GAAACCGATC CCAATATTGG CGAATACACG TTCCTTTCCA TAGGCCCTGA TGGTGGCTCA
AGTATGCAGC GTCGCCATCA AGATGGCTGG TCCTTGCAGA ACGATCTAAC GTTCACCAGT
GTTAAGTGGC ATGGTGACCA CACTATTAAA ATGGGTGTCA GCTATAAGAA CATTACGCTG
CAATCACAAG ATGCGGCATC GTTGAACCCT CAATTCAGTT ATGCGGTGAG TTCCAGTGGA
GTGGCCACAA CGCCATACCG CGTTGATTTC TACTCACCCT ATGCGACGCC TGGGCAGAAG
GCGCTGGTGG AAACCAGGGC CAAGCAGTAT GGCCTTTATC TTCAGGATGA TTGGAACGTC
AATGAGAAAC TGACGCTGAA TTTGGGGATG CGTTGGGATT ATGAGGACAA TCCGGCTTAT
ACCAATTTTG TCACTTCGCA GGCGTTTGTT GCCGCACTGT ATGCGGATGA TCCGGAGAAT
CCAGGTCACC CGTGGGCGAA TCGATTACTG CCTAGCGGTA TCAACGTTGC TGATTACATC
AGTAATGGTC ACAACCGTCA TAACTTCAAT AAGGGGTGGG CACCACGCTT TGGTTTCTCT
TATGACATTT ATGGTGATGA AGCGGCGGTG ATGCACGGTG GTGCTGGGCG TTCGTATGAT
CGTAATCTAT TCGAACAAAT GGCTTATGAG ACTAGTAAAG CGGCGTTGTC GCCGGTTGCC
GTGTATTTCC AAGATCCAGC CACCCATACG TGTTATCACT CTGATCGGCT TTGTGTGCCT
TGGGATCCGA AATATCTCAA TGGCATTGAT CAATTAAATG CGATTGCTGG GGTCAGTGGC
AGCGGTGAAC TGTTTATCTT CAACAATAAG CTGAAGACGC CTTACAGCGA CCAATACAGC
ATCGGTATCA GCAATAAGAT AGGCGGTTGG TTGACTGATG TGACGTTTCA GCGTGTATTG
AGCAATGACG GCTTTGTGAT GTCGCTTGTC AACCGCTATC CAGATGGTCG GTATTTTGAT
GCTGAAGGTA ACGCGCCATG GGATCAGTCG GTCCCTGGTC ACAAAAACAC GATTCTCGGC
ATGAATGGTT TGAAGCAGCG TAGTAGCCAA GTGCTGTTGT CTGTTGAGAA GCCTTATAGC
AAGGAATCCG GTTGGGGAGT CAATGTGGCC TATACGCACA CCAGTGCGCG TCAAAATCGC
ACCATTGATG AACCATTTGC TTTCGACAAG GCAACGATCT ATGAGTATCC GTTCGTCAAG
TCCGATGCGG TTGCCGCGCA CCGTTTGGTT GTTTCCGGTT CGATGGATGG GTTGTGGGGG
ATGACCTTTG GCGCCAAGGT GGTGCTGGCC ACCCCCACCC CGATCAATAC GATTGCTTGT
TACGGTCAGA TTGATCAAGA TGGTGCGAAT TGCCAGCAGG TGGGAGTTAT TCCACCGTCC
AGCGGAAAGT TCCTGGTTGG AGGCAACATT TGGGGGTATC GCACGGTGGA TTTCCAGGCC
AGTAAAGAGT TCACAGTGTT TAACGATTTC AAGCTATCGG CCCGTGTGAA TCTGCTCAAT
GCGTTTAATT TCAAGAATTA CGCATCTTAT GTCTATAACA GCTTTGGGAG TGATGGGCGA
TTGCAACCGG ACATCACCAT CAATCGGATC GGCGATATCA ACTATGTTCC ACGTACCGTC
ACATTCGAGC TTGGGATGAA GTTCTGA
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| Protein sequence | MKKSCSSQLL QIRRLLCYAL AVCLYLALPN AFAQSSNATL RGQVSRAQAG AVVLVTNTAT
GLVRRSTLLS DGTYAMTGLP PGQYTISVGG VSRTVTLSVA SSVTVNLDAG VPISGDAKTL
DAVQVTGQTI REVKTSEIGN TIALRQIQQL PQATRNFLEF ADTVPGMAFN IDPQGRTTLR
AGASNSSASN LYIDGVGQKS YVAKGGISGQ NDSQGSPFPQ LAIGEYKIIT SNYKAEYGQI
GGAAVTAATK SGTNEFHGET FYRYTNQNLR DRRPDEGETK VDSQTKEYGF ALGGPIIRDR
MHFFFAYEGK DNVVPRSVQA DARAAPYVHF LPSYLSQQYG AVNLPFNEDL FFGKIDFEPS
GDDRLELSVQ YRDETQIDNI GGQNAADHGL NKTNKDKRGS LRWQHSADAW FNELIFTREN
ARNNPNPMSI GNGFNYVYLD ETDPNIGEYT FLSIGPDGGS SMQRRHQDGW SLQNDLTFTS
VKWHGDHTIK MGVSYKNITL QSQDAASLNP QFSYAVSSSG VATTPYRVDF YSPYATPGQK
ALVETRAKQY GLYLQDDWNV NEKLTLNLGM RWDYEDNPAY TNFVTSQAFV AALYADDPEN
PGHPWANRLL PSGINVADYI SNGHNRHNFN KGWAPRFGFS YDIYGDEAAV MHGGAGRSYD
RNLFEQMAYE TSKAALSPVA VYFQDPATHT CYHSDRLCVP WDPKYLNGID QLNAIAGVSG
SGELFIFNNK LKTPYSDQYS IGISNKIGGW LTDVTFQRVL SNDGFVMSLV NRYPDGRYFD
AEGNAPWDQS VPGHKNTILG MNGLKQRSSQ VLLSVEKPYS KESGWGVNVA YTHTSARQNR
TIDEPFAFDK ATIYEYPFVK SDAVAAHRLV VSGSMDGLWG MTFGAKVVLA TPTPINTIAC
YGQIDQDGAN CQQVGVIPPS SGKFLVGGNI WGYRTVDFQA SKEFTVFNDF KLSARVNLLN
AFNFKNYASY VYNSFGSDGR LQPDITINRI GDINYVPRTV TFELGMKF
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