| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0327 |
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| Symbol | |
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| ID | 6120630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 376628 |
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| End bp | 382072 |
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| Gene Length | 5445 bp |
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| Protein Length | 1814 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641648403 |
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| Product | hemolysin-type calcium binding protein |
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| Protein accession | YP_001774977 |
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| Protein GI | 170729544 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0391395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCA CTGCAGAACA AGCCAATGCA TTACTGGGCA GCATCACCAC CAAGGAGCAG
TTGTGGGATT TAATTAATCA GCTCGATATT CATAGCAGCG GCAGTATCAC GGTTTTATAC
AGTGGTTATA CGGCCAATGG GGTCAGCAAT TCGCAGATTC TTCAGGGGAT GCTGCACAAC
GGGGATACTA TCCGGGTGAT TGATACCACC GAGGCCGCCA AGTTTCTGAA TATAGAGCCG
GGTGATCCCA ACAGAAATAA GGCGCTTGCT GAAAAACTAG AGCAAATTAT TGGTGATGAC
CCTAATGAGA GGGGTAGCCG CGCCAACGAA TTCCTGTTTG GTGAAAGAGC CGCCGATGGC
ACGCGTCTTC CGAATGGGGC TTGGGACACG ATCTCGGCCC GCTTTGTGAA TGAGACGGTG
GGTGAGGTGC GCACCCTGAC GGGCGGTGCC TCGGTCACTG GGGTGTTTAA TCAAACCGAA
CTGCCGCGCC TGCTGAACAA CCCCAATATC ACCTCGGTGG ATGGGTTGCC TATCGCTGAT
TTGCGGCGCT TGGGGGCGGC GGGGTCCTTC CAGGCGATTT CAGCGCAGTC AGAGCATCTT
TCTGGCTACT TAAAGCTGGC CATCAATGCA GATGGCTCCA TCATGGAATT ACCCGGTGGG
GTGCCACGTT TAGACAGCCA GCAGTACTTT GCGCTTACCG GTTTGGAAGG CAAGCCGCCG
CTGGTGGATG CGGGAGATTA CGGTGCCCTG GCCCGATACA TCCCCGCGCG CTTGGACAAT
CACTTGGAGG GCGCACGTCT GGTGCAGGAC ATCAAAGACG GGTATCAGCG TACCACGCAG
TTGTTGGGGC CGGAGTCTGC TGCGGCACGT GCTAATGCGT TGCGGGTGCT GGGTAAACTC
GGCGTGGCCG CCGATCTGCT GTCGCTGGCG GTGATGGCGC ACGATGCCAA TGCGGCGTAT
GCCAGTGGCA ATATCGAGGG CAGCCGGCAG ATTGTGCAGG ATTGGACCAG TCAGTATCTG
GGTGGCTTGA TGGGTGGTTT GGCGGAGGCC AAAGCGGTTG GGCTGCTGTT GACTCCGGTA
TATCTGGATG GCCCGATTGG GGCGGCTGTT GCTTCGGTGT TGACGGTGGC GGCCGGTGTG
GAAGGCACGT TCTTAGGCAG TCATTACATT GGCGCTTTTC TGGATAAGGT GTTTGACCAG
TTGCACCACA TCGGGGAGTT GTCAGGGTCG AGGTTGTATG ACTGGGTCAC TCAGATAGGC
GATCTATTCA GACGCCTGAA TCAGACATTG CATAAAGACA ACGCGTCCCT GCTAGATCTG
CTGCATGACC TGTTTCGTAA TAGCCGTGAT GAGCGCGACC CGCTGGTGCT GGACCTGGAC
GGTGACGGCA TCGAAACGCT GGCTGCGGGC AAACACATCC TTTTTGACCA CGACGGCGAC
GGCATCACCC ACGCCAGCGG CTGGGTGAAG TCCGATGACG GCTTGCTGGT CCTGGACCGC
AACGGCAACG GACGTATTGA TAACGGCAGC GAACTGTTCG GCGCCGATAC CGTGCTCAGC
AACGGTCACA CCGCCGCCTC TGGCTTTGAC GCGCTGCGTG ATTTAGATAG CAACGGTGAT
GGCCTCTTCA GTGCTGCCGA CGCCCGCTTT ACGGACGTGC GCGTCTGGCG CGATCTCAAC
CAAGATGGCC AGTCCCAGGC CAACGAACTG TTCACCCTCT CCACCCTGGG CATTGCCTCC
ATCACCCTCA CGCCTACGGA CACCCAACGC GTGAACCTGG GCAACGGTAA CGTGATGGAT
GCCCGCGGCA GCTACACCCG TACCGATGGC CGCAGCGGCA CCGTTGGCAA TCTGCAATTA
GGTGTGGACC AGTTCTACCG CGATTACCGC GGTGCCCACG ACAAGGTGAC CATCAGCGAG
GCGGCCCGCG CTTTACCGGC CATCAGCGGC AGCGGCGCAG TGCGCGATTT GCAAGAGGCC
GCCAGCCTGT CGCCTGCCTT ATTGGCGGCG GTGCAAGTGC TGCTCTCTGG CACCACCCAG
GGCACACTGC GTGCGGCGCT GGATCAGGTG ATCGCCCTGT GGGCCAGCAC CTCGACCATG
CGCAGCAGCG AAGAACTCTT GGAAGCCTCT GGGGAGGGCA ACCGCACGGT GTATTACCAC
AGCGTGGTGA TGCCCGTGAG CGTAGCCTCC CAGGGCAAGG AGGCAGTGCA AGCCTGGATA
CAACAGCAGC ACGCCCGGCT TGGACCGATC ATCGGCATTT TGGAGAAGTT CAACGGCTCC
CGCATGGTCA GCGAGCAAAA CGGCCAGATC ATCCTGTGTG GGCAGAGCTT CACCTGGCAA
CGTGTTGTCC GTCCTGACGG ACACAGTGAA ACAGTGATGG ACCTTGGGCT GGTGCCGGAG
GTAGTAAGCA ACACCTTCGA CGCCTTTACC GAGGCCTACG CCAAGCTCAA AGAATCCATC
TATATCCGCC TGGTGCTGGA GCCACGGCTC ACTGATTACC TGTCCGGACT CCGCCTGACC
TACAACAACG GCGTGATGGG ATGGGATGCC TCCGGCCTGG AGGCCAAGTT AGATCAGACC
TGGCAGCACA ACAAAGTTCA GGCGCTACAG GATGTGATGG ACCTATACCA CTACAGCAGC
GATGCTCTGG CCCCCAGCGG CTGGAATCCG CTGGATGCCT TACGCCAGAT GGTCGACCGG
ACTGCGGCAA CGCCCGATGG AAGGCAGGCC CTGGCCGATG CGGGCATTCC CCAGATTGCC
GGAAATGCCG AAGGCAGTGA CGCCGCAGAT CTGCTGTTTG GCGATGCGGG TGCCAATCTC
CTGCGGGGCG GCGGCGGTGA TGATGTGCTC TCCGGCGGCG CTGGCAACGA CACGCTGTAC
GGTGGTGATG GCAACGATGC CCTCTACGGC GATGCGGGTA ACGACACCCT CTACGGCGGT
GTCGGCAATG ATCTGCTGCT GGGCGGTGCT GGCGATGACC TGCTGGACGG GAGCGAAGGC
AGCAACCGCC TGGAGGGTGG CGCCGGTAAC GATGTACTGA AGGTGGCGTA TTGGTCCACA
GATAACGTAC TGAACGGCGG CAGTGGCGAT GACCTGTTGG ACGGCAGCGC TTACGGGGAC
ACGTATCTGT TCAACAAAGG AGACGGCCAC GACACCCTCA TTGAGCGAGA CGGTACTGAC
ACGCTCGTGT TTGGTGCGGG CATTGTTGCT AGCCAGGTGC GGCGGCTGCA CGAAGGGCAA
GACGTGGTGT TGGACCTGGG CAACGGTCAG GACAGTATCC GCTTGAAGGA CTGGTTGACT
TGCTATGGCA CCCGCAACGA TAGCGCCGAT ATTGAACAGA TCGTCTTTGC CGATGGAACG
CTCTGGACCC CGGAAACCTT GAGCAGCATG GGCCTCACCA CGCTGGGCAC CTCCGGCAAT
GACACCCTCA AGGGCTGGCA AGGCAAGGAT ATTCTGCTGG GCGGCGATGG CGATGACATC
CTAGACGGCG GCGACGGCAG CAACCGTCTG GAGGGCGGCG CCGGTAATGA TGTACTGAAG
GTGTCGTATT GGTCCGCAGA TAACGTGCTG AACGGCGGCA GCGGCGATGA CACGTTATAT
GGCAGCGGTC ACGCGGATAC ATACCTATTT AATAAGGGAG ACGGCCACGA CACGATTGTG
GAACATTATG GTTCTGAAAA GATCGTCTTT GGTGCGGGGA TTGTTGCTGA CAATGTCCGG
CTGCTGCGCG AAGGGCAAGA TGTAGTGCTG GACCTGGGCA ACGGCCACGA CAGCATCCGT
TTTAAGGACT GCTTTCATGC AAATCATAAC CGCAACATAT TTGTCAACAT TGAGCAGATG
GTGTTTGCCG ACGGCACGGT ATGGACCGGG GAGACCTTGA GCACGCTGGG CTTCAGCACG
CTGGGCGGGG ATGGTGATGA CGTGCTGGAC GGTGGTGAAG GGAGTAACCG TCTGGAGGGC
GGCGCCGGTA ACGATGTGCT GAAGGTGGCA TCTAACTCCT CAGATAACGT GTTCAGCGGG
GGCACCGGTG ATGACATGTT GTACGGGAGT GCGCATTCGG ATACGTATCT GTTTAATCAG
GGGGACGGCC ACGACACCAT CATTGAACCA GGAGGGAGCT TCGATAGGCT CGTCTTTGGC
GAAGGGATTA CTGCCGACGA TGTGCGGGTA GTGCGCCAAG GGCAAGATGT GGTGTTAGAC
CTGGGCAACG GCCACGACAG TATCCGCATG AAGGATTGGC TGACCTCTGA TGGCGAATAC
AATCGCACCG GCAACATTGA AGAAATCCTT TTTGCTGACG GCACGAGGTG GACAGGGGAT
ACGTTGGGTT GGAGGGAGAT GACGACGTTC GGTACTTCTG GTAATGACAC TCTGCAGGGC
TGGGGAAGCT CGGATATTCT GCTAGGTGGC AATGGGGATG ATGTGCTGTC CGGGGATTAT
GGAGACGACA CGCTTTATGG AGAAGCAGGA GACGATCTGC TGTTAGGTGA TAATGGAAAC
GACGTGCTGG ACGGTGGGGA AGGCCACAAC CGCCTGGAGG GCGGCGCCGG GAAGGATGTG
CTGAAGGTGT CTACGGATGG CTCCTCGGAC AACGTATTCA GCGGGGGTAC CGGTGATGAC
ATGTTGTACG GGAGTGTGCA TTCGGATACG TATCTGTTCA ACTGGGGAGA TGGTCGCGAC
ACCATTGTGG AACAGGGTGG TTTCGACAAG ATCGTGTTTG GTGAGGAGAT TGCCGTCAGT
GATATACACG TGCTGCGTGA AGGTCAGGAC GTTGTGCTGG ATCTGTATAA CGGATACGAC
AGCATCCGTT TAAAGGATTG GTTGACGTCC GATGGTACCC GCAACAGTAA CGCCGACATT
GAACAGATCG TGTTTGCCGA TGGCACGGTA TGGAGCGGAG AGACATTGAG CAGCATAGGT
CTGAAGACGC TAGGAAGCGC AGACAATGAC ACGCTGAACG GCTGGAACGG CCGGAACATC
CTGGTTGGAG AGGATGGCGA TGATGTGCTG AAGGTATCTA TGTTTGACTC CTCGGATAAC
GTATTGGTCG GCTGCAGGGG CAACGATATG CTCTACGGCA GCAGCAATTC AGACATCTAC
TTTTTCGATC AGGGAGACGG CCACGACACC ATCATTGAGC AAGGTGGTGC TGACACGCTC
GAGTTTGGTG AGGGGTTGCA TCGGGAGGAG GCGTGTTTTA CGCGCTCAGG TGATGATCTG
TCTATCCTGT TCAATGGGAG TGAGGATCAG GTGACTGTGG CGGGTTGGTT CAGTGCGGCG
GCGCATCAGG TGGAATCGTT GGTGTTCCAG GATGGGACGG TGTTGTCCGG TGAGGTGGAG
CGTTTGATTG CGGCGATGGC GCTGTCACCT GCGGTGACGA CGATGCAAGC CAGTGTGCGT
GATATCAAGG AGTCGCCCAG GTTGGTCGCC AGTTCGATTG TGTGA
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| Protein sequence | MTLTAEQANA LLGSITTKEQ LWDLINQLDI HSSGSITVLY SGYTANGVSN SQILQGMLHN
GDTIRVIDTT EAAKFLNIEP GDPNRNKALA EKLEQIIGDD PNERGSRANE FLFGERAADG
TRLPNGAWDT ISARFVNETV GEVRTLTGGA SVTGVFNQTE LPRLLNNPNI TSVDGLPIAD
LRRLGAAGSF QAISAQSEHL SGYLKLAINA DGSIMELPGG VPRLDSQQYF ALTGLEGKPP
LVDAGDYGAL ARYIPARLDN HLEGARLVQD IKDGYQRTTQ LLGPESAAAR ANALRVLGKL
GVAADLLSLA VMAHDANAAY ASGNIEGSRQ IVQDWTSQYL GGLMGGLAEA KAVGLLLTPV
YLDGPIGAAV ASVLTVAAGV EGTFLGSHYI GAFLDKVFDQ LHHIGELSGS RLYDWVTQIG
DLFRRLNQTL HKDNASLLDL LHDLFRNSRD ERDPLVLDLD GDGIETLAAG KHILFDHDGD
GITHASGWVK SDDGLLVLDR NGNGRIDNGS ELFGADTVLS NGHTAASGFD ALRDLDSNGD
GLFSAADARF TDVRVWRDLN QDGQSQANEL FTLSTLGIAS ITLTPTDTQR VNLGNGNVMD
ARGSYTRTDG RSGTVGNLQL GVDQFYRDYR GAHDKVTISE AARALPAISG SGAVRDLQEA
ASLSPALLAA VQVLLSGTTQ GTLRAALDQV IALWASTSTM RSSEELLEAS GEGNRTVYYH
SVVMPVSVAS QGKEAVQAWI QQQHARLGPI IGILEKFNGS RMVSEQNGQI ILCGQSFTWQ
RVVRPDGHSE TVMDLGLVPE VVSNTFDAFT EAYAKLKESI YIRLVLEPRL TDYLSGLRLT
YNNGVMGWDA SGLEAKLDQT WQHNKVQALQ DVMDLYHYSS DALAPSGWNP LDALRQMVDR
TAATPDGRQA LADAGIPQIA GNAEGSDAAD LLFGDAGANL LRGGGGDDVL SGGAGNDTLY
GGDGNDALYG DAGNDTLYGG VGNDLLLGGA GDDLLDGSEG SNRLEGGAGN DVLKVAYWST
DNVLNGGSGD DLLDGSAYGD TYLFNKGDGH DTLIERDGTD TLVFGAGIVA SQVRRLHEGQ
DVVLDLGNGQ DSIRLKDWLT CYGTRNDSAD IEQIVFADGT LWTPETLSSM GLTTLGTSGN
DTLKGWQGKD ILLGGDGDDI LDGGDGSNRL EGGAGNDVLK VSYWSADNVL NGGSGDDTLY
GSGHADTYLF NKGDGHDTIV EHYGSEKIVF GAGIVADNVR LLREGQDVVL DLGNGHDSIR
FKDCFHANHN RNIFVNIEQM VFADGTVWTG ETLSTLGFST LGGDGDDVLD GGEGSNRLEG
GAGNDVLKVA SNSSDNVFSG GTGDDMLYGS AHSDTYLFNQ GDGHDTIIEP GGSFDRLVFG
EGITADDVRV VRQGQDVVLD LGNGHDSIRM KDWLTSDGEY NRTGNIEEIL FADGTRWTGD
TLGWREMTTF GTSGNDTLQG WGSSDILLGG NGDDVLSGDY GDDTLYGEAG DDLLLGDNGN
DVLDGGEGHN RLEGGAGKDV LKVSTDGSSD NVFSGGTGDD MLYGSVHSDT YLFNWGDGRD
TIVEQGGFDK IVFGEEIAVS DIHVLREGQD VVLDLYNGYD SIRLKDWLTS DGTRNSNADI
EQIVFADGTV WSGETLSSIG LKTLGSADND TLNGWNGRNI LVGEDGDDVL KVSMFDSSDN
VLVGCRGNDM LYGSSNSDIY FFDQGDGHDT IIEQGGADTL EFGEGLHREE ACFTRSGDDL
SILFNGSEDQ VTVAGWFSAA AHQVESLVFQ DGTVLSGEVE RLIAAMALSP AVTTMQASVR
DIKESPRLVA SSIV
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