| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0293 |
|---|
| Symbol | |
|---|
| ID | 6120596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 340374 |
|---|
| End bp | 341543 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648372 |
|---|
| Product | polyphosphate-selective porin O |
|---|
| Protein accession | YP_001774946 |
|---|
| Protein GI | 170729513 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3746] Phosphate-selective porin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCCA TCAAGTTTCT TTTCACTCTA TGCTTGACAA GCACCGCTTC CGCTGCCGTC
GCTGGCGACT TTAACCACTG GCCATTGCAA TACACCTTTG GCAACGCAAC AGAAGCTTCG
TTAACCGGAA ACTTTGCTTA CGACTACAAC AACTTCTCTG GTGATGATCG TCTTAAAGAC
AGAAGTTTTA TGCGCCGCAA AGAATTGGGT ATCTCAATTA AAAAGAAGGA TGTCTATGAC
GCCGCTGTTG CCTTTGACTT CCAATCCAAA CTGTGGCTTG ACGTTTTCTT CCGCATTGAA
ACAAAAGCAC TCTTTGACCA GGATTACGGC CGTATCCGCC TAGGCTACAT GAAAACCCCA
GTGGGTATGG AAGCACTCGC CAGCTCACGC GCTGGAAGCT TCATGGAAAC TGCACTGCCG
GTGCAATCCA TCTATGAAGG GCGCCGTACC GGCGTGGAAT GGGTGCTGGA ACGTCCACAG
TACCTGCTGC AAACCGGTGC CTACGGCGGA AAAGATCTAC AAGGCGACAA CCCGGGCACC
ACCCAAGCCA TCCGTGCAAT ATGGACTCCG TTCAAGACCA CTGGCGACGT ACTGCACTTG
GGCGTGTCCT ACTCACAGGA AAACCCACGC GGCTACCATA ACGGCTCAAA CGTATCCTTC
AGCCCACGCA CCCGGGTACG CGCCCGTCCA GAAAGCGGAC TGACCGACGT GCGCCTCATC
GACTCGGGCA CCCTGGTTGA CGTTGACAAA ATCCAACGCA ACGGCTTGGA GCAACTATGG
ATCCACGGCC CACTCCTGGT ACAGAGCGAA GCACTGCATA TCAAAGTGAC ACGTAATAAC
GGCCTACCCA CTTACAACGG CAACGGCCAG TACATCTACG GCAGTTGGGT ACTCACTGGC
GAATCCCGGC CTTACACAGC CGGCACCATT GGCAATGTCA CTCCCAAGCA CGACTACGGC
GCAGTCGAAT TACTGGCCCG CTACAGCCGC CTCAACCTGG ATAACGGCAG CATCCTCGGC
GGGCGTCAAC ACGACTGGAC CATCGGCGCC AACTGGTACC TCACCAACTA CTTCAAATTC
CAAGCAAACT ACGTCAAAGT CAACGCTACT CGCCTTGGCA CACGTACCAC ACCGGATATT
GTCGAGCTAC GCGCCCAAGT TCATTTTTGA
|
|---|
| Protein sequence | MRPIKFLFTL CLTSTASAAV AGDFNHWPLQ YTFGNATEAS LTGNFAYDYN NFSGDDRLKD
RSFMRRKELG ISIKKKDVYD AAVAFDFQSK LWLDVFFRIE TKALFDQDYG RIRLGYMKTP
VGMEALASSR AGSFMETALP VQSIYEGRRT GVEWVLERPQ YLLQTGAYGG KDLQGDNPGT
TQAIRAIWTP FKTTGDVLHL GVSYSQENPR GYHNGSNVSF SPRTRVRARP ESGLTDVRLI
DSGTLVDVDK IQRNGLEQLW IHGPLLVQSE ALHIKVTRNN GLPTYNGNGQ YIYGSWVLTG
ESRPYTAGTI GNVTPKHDYG AVELLARYSR LNLDNGSILG GRQHDWTIGA NWYLTNYFKF
QANYVKVNAT RLGTRTTPDI VELRAQVHF
|
|---|
| |