| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0284 |
|---|
| Symbol | |
|---|
| ID | 6120587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 330784 |
|---|
| End bp | 332115 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648363 |
|---|
| Product | Mg++/citrate complex transporter |
|---|
| Protein accession | YP_001774937 |
|---|
| Protein GI | 170729504 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2851] H+/citrate symporter |
|---|
| TIGRFAM ID | [TIGR00784] citrate transporter, CitMHS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACTG TGCTCGGCTT CGGAATGGTC ATCACCTTCA TGTATTTGAT AATGAGCAAG
CGGCTTTCGC CGCTGGTCTC ACTGATCATC GTGCCCATTG TGTTCGCATT GGCTGGCGGC
TTCGGCTCCA GCATGAGCGA AATGATGCTT GAAGGGATCA AAAAGATTGC GCCAACCGGC
GTGATGCTGA TGTTCGCCAT TCTTTACTTC GGGGTGATGA TTGATGCTGG CCTGTTCGAT
CCGCTCGTAC GGCGCATTCT GCGGATAGTC AAAGGCGATC CGATGAAGAT CGTGATGGGT
ACGGCAATCC TGGCGCTACT GATCTCACTC GACGGTGACG GCTCGACAAC CTACATGATC
ACCGTCTCGG CAATGCTACC GCTGTACCAG CGTCTGGGCC TAAACGCACT GAATCTGACT
TGCGTGACCA TCCTGGCCGG CGGAGTGATG AACCTGACAC CATGGGGCGG CCCAACCGCA
CGCGCGGCGA CCGCACTACG TGTCGATCCA GCCGATGTCT TCATCCCCCT CATCCCGGCG
ATGGGCATCG CCATCATCGG CATTCTGACG CTGGCATGGT GGCTAGGCAT GAAGGAACGC
AAACGTCTGG GTGTGGCCAA ATTGCCTGAC AGCGGCGCTT GGAATGGTTA CGCAATGCAC
GATGATGAAG ATGCGCTGCC CACCATGGAA GGCGATGCCG AAGATATCAA GCGACCCAAG
CTGCTGTGGG TGAATTTTGC GCTCACTATC GCCCTGATGG CCGGATTAGT CGTTGGTATA
CTTCCGATGC CCATCCTGTT CATGATCGGC TTCGCATTAG CACTCCTGAT TAATTATCCA
AACTTGGCAG AACAACGCCG TCGTGTGGTT AATCATGCAG GGAACGTTCT TTCAGTGGTC
TCGTTGATCT TTGCTGCCGG CATCTTCACA GGCATCTTGT CAAACACTGG AATGGTCGAC
GCGATGTCAC GCAGCTTTCT GGCACTCATC CCAGACAGCT TTGGGCCCTA CTTGGCGGTG
ATTACTGCTA TCGCCAGCAT GCCCTTCACT TTTTTTATGT CCAACGATGC GTTCTATTTC
GGTGTGCTCC CGATCCTATC CGAAGCCGCC AGCCACTACG GCATTACCCC TGTAGAAATG
GCACGTGCCT CATTGGCTGG GCAACCAGTA CATCTACTGA GTCCACTCGT TCCTTCCACC
TACCTACTGG TCGGACTTGC CAAAGTAGAT TTCGGTGACC ACCAGCGTTT TTCCCTGAAA
TGGGCGGTGT TAATCTCAAT GGTGCTATTA CTCAGTAGCC TATTGTTTTT GATTTACCCA
CTGGCCGCAT GA
|
|---|
| Protein sequence | MLTVLGFGMV ITFMYLIMSK RLSPLVSLII VPIVFALAGG FGSSMSEMML EGIKKIAPTG
VMLMFAILYF GVMIDAGLFD PLVRRILRIV KGDPMKIVMG TAILALLISL DGDGSTTYMI
TVSAMLPLYQ RLGLNALNLT CVTILAGGVM NLTPWGGPTA RAATALRVDP ADVFIPLIPA
MGIAIIGILT LAWWLGMKER KRLGVAKLPD SGAWNGYAMH DDEDALPTME GDAEDIKRPK
LLWVNFALTI ALMAGLVVGI LPMPILFMIG FALALLINYP NLAEQRRRVV NHAGNVLSVV
SLIFAAGIFT GILSNTGMVD AMSRSFLALI PDSFGPYLAV ITAIASMPFT FFMSNDAFYF
GVLPILSEAA SHYGITPVEM ARASLAGQPV HLLSPLVPST YLLVGLAKVD FGDHQRFSLK
WAVLISMVLL LSSLLFLIYP LAA
|
|---|
| |