Gene Xfasm12_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0271 
Symbol 
ID6120574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp315474 
End bp316157 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content56% 
IMG OID641648350 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001774924 
Protein GI170729491 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCAGC CGCGTGGTGA GATCACTCTG GATGTGCCCG TGGTTGAGTG GTGCGCCGTT 
TGCAAAGGGT TGCGTGACGA GTTCGACTTT GAACAGTTAT CCGATCTTTG CGGGGTGGAC 
TATCTTGGCT ATGGCAATGC GGAGTGGGAC ACCACTGGTG TATCCGCGCA GGGGTTCAGC 
CGTGGCGTTG CTGGTAAGGC GGTTGGCCGC TTTGCTTGGG GTGAGTTTCC AAGTGCAGGC 
ACCAATGATG GTACTCAGCC GTGGGATGTT CCGCAGGAGC GCTTTGCAGT GCTCGCGCAC 
CTCATTTCTT ATCGGCATAA CCGGCGTTTG CGGGTGCGTT GTTTTGCTTC CAATGATGCG 
TTACCGATCG TCGCTTCGCT GACGGACGTA TGGCCTGGGG TGAATTGGTT CGAGCGTGAG 
GCATTTGATT TGTTCGGTAT TGTGTTCGAG GGGCACCTTG ATTTGCGTCG CATCCTGACG 
GACTATGGAT TCATTGGTCA TCCCTTTCGT AAGGATTTTC CGCTGACCGG CAACGTTGAG 
GTGCGTTACG ACGAGGAAAA GAAGCGTGTT GTGTATGTCC CAGTCACCTC GGTTGAGCCG 
CGTGTCAGTG TTCCGCGGGT GATTCGTGAT GATGCCCGCT TTGGGGCTGC AGCGGGCGAA 
TCTACTCATT CGGAGACGGT TTAA
 
Protein sequence
MAQPRGEITL DVPVVEWCAV CKGLRDEFDF EQLSDLCGVD YLGYGNAEWD TTGVSAQGFS 
RGVAGKAVGR FAWGEFPSAG TNDGTQPWDV PQERFAVLAH LISYRHNRRL RVRCFASNDA 
LPIVASLTDV WPGVNWFERE AFDLFGIVFE GHLDLRRILT DYGFIGHPFR KDFPLTGNVE 
VRYDEEKKRV VYVPVTSVEP RVSVPRVIRD DARFGAAAGE STHSETV