Gene Xfasm12_0266 details

Gene Information

• Locus tag: Xfasm12_0266
• ID: 6119769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 312082
• End bp: 312720
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641648344
• Product: acriflavin resistance protein
• Protein accession: YP_001774919
• Protein GI: 170729486
• COG category: [V] Defense mechanisms
• COG ID: [COG1566] Multidrug resistance efflux pump

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATGCGC GCCGCGCCAG CGATTTGTCC AGTGTCTGTG TGCTCAGTAA GCAGGCAACG 
GAGCAGTCGC GTATCGCGGT GACCACGCTT AAAGCGCAGC TTGAAGCAAG TCGCAAGGCG 
GCCGATGTGG CGCGGGCGCA GGTTGCTCAG GTCAAGATTA ACTTGGGTTT CACGGTGGTA 
CGTGCACCTT TGGCCGGTGT AGTGATTGAG AAGGCGGCGC AGGTGGGCGA GATCGTTTGG 
CCGTTATCTG CCGGCAGTGA TTTTATCCGA TCTGGCATAG GCACCATTTT GGATATGGAT 
TTGCTAGAAA TTGATGTTGA CGTTAATGAG GTTTACATCT GTCATGTGAA GGTCAACATG 
CCTATTGAGG TGGTGTTGAC GGCTTATCCT GACTGGCGCA TCCCGGGGCA TGTCGTTGCC 
ATTGTGCCCA CGGAGGATAA AGGAAAGGCC GCGGTGAAGG TGCGTATTGC GCTGGAGCAG 
AAGGATCCAC GTATAACCTC CAGCATGGGG ACGCGTGTTT CTTTTTTGAA AGCTGAATTT 
GCAGTGGCCA GTGAGGCAGT GTCGCCAAGT GGTGTGTTGT TGCCGTCATC TACAGTGGTG 
CAGGGTGGTC AGCACCGGGT TGTTTACCGT GTGCAGTGA 

 

Protein sequence

MDARRASDLS SVCVLSKQAT EQSRIAVTTL KAQLEASRKA ADVARAQVAQ VKINLGFTVV 
RAPLAGVVIE KAAQVGEIVW PLSAGSDFIR SGIGTILDMD LLEIDVDVNE VYICHVKVNM 
PIEVVLTAYP DWRIPGHVVA IVPTEDKGKA AVKVRIALEQ KDPRITSSMG TRVSFLKAEF 
AVASEAVSPS GVLLPSSTVV QGGQHRVVYR VQ