Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0250 |
Symbol | |
ID | 6119752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 290621 |
End bp | 292066 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641648331 |
Product | heat shock protein |
Protein accession | YP_001774907 |
Protein GI | 170729474 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACCGC TACCTACTTT ACTGACGCTA TCTATCGCTG CCGCATTCGG CGGTTTTGCA GCCACTGGGA TGAATGCTTG GCTTGACAAC CGCGCCGAAG CGGCATCCAA CACCAATGCT ATCTCACCAA TATCATCACT GCCAACGGGC ACGGTGCCTC AAACCACAGC CGCCAACCAG CCGCTACCAT CGTTAGCACC CATGCTGCAA CAAGTGATGC CAGCAGTGGT CAGCATCAAC AGTAAACAAG TGGTACGGGT GCGCAATCCA TTTTTCGACG ACCCGATCCT ACGTCGGCTA TTCCCAGAGA TCCCCCAAGA ACGCATTAAT GAGTCGCTCG GATCTGGGGT GATCATCGAC GCGCGCAATG GCTACGTACT TACCAATCAT CATGTGATCG AAAATGCCGA CGCCGTGCAG GTGACATTAG CAGATGGGCG CAGCTTCAAG GCCGAGTTCC TCGGTTCTGA CGCAGACACC GACATCGCCT TGATCCGGAT AAAAGCAAAT AAACTGACCG AAATCAAACT CGCAGACAGT AACAAATTAC GCGTGGGCGA CTTCGTCGTA GCCATTGGTA ACCCGTTCGG CTTTACCCAA ACGGTGACCT CAGGCATCGT CTCGGCGGTA GGTCGCAGTG GCATCCTCGG CCTGGGTTAC CAAAACTTCA TCCAAACCGA CGCATCGATC AACCCGGGTA ACTCAGGCGG CGCACTGGTG AATCTTCATG GCCAGTTGGT TGGCATCAAC ACGGCCAGCT TCAACCCACA GGGCAGCATG GCTGGCAACA TCGGCTTAGG CCTGGCGATT CCTTCGAATC TAGCGCGCAA CGTCGTCGAG CAATTGGTCA CGAAAGGCGT TGTGGTACGC GGGACAATCG GCGTACAAAC ACAGAATATT GATGCACGAA TGGCACAAAG CTTAGGCCTG AGTAATCCAC ACGGCGCATT AGTGACTCGC GTATTACCCA ATTCCGCTGG TGCCGCAGCC GGACTGCAAC CAGGTGATGT GATCCTGGCA GCCAATGACC AAAGGGTGGA CAACGCGGAA ACATTGCACA ACTACGAAGG ACTACAGCCC GTCGGTAGCT CAGTAACACT GGAAGTACAC CGTGGCGGCA AGCCACTCAA AATACGCCTC ACACTCAAAG AATTGCCACG CACAATCGCC GGAGAAACGC TGGATTCACG ACTGTCGGGC GCCATCTTCG TTGACCTGCC AGAGTTCCTC CGTCAATCAG GAATCGGTGG AGTCATGGTC AACAAAGTCA AACACGGCAG CCGCGCTGCG GCCAATGGGT TGGTAGCCGG AGATGTCATC ATTGCCGCAC CCATCGGTGA ATTCTCTGAC TTGGCAAGCT GGCAGGCAAG CTTTTCCCGC CCACCACAAC GGCTGATACT GCGTGTGCTG CGCGGTAACG CACAGTATGA TGCGCTGATG CGCTGA
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Protein sequence | MRPLPTLLTL SIAAAFGGFA ATGMNAWLDN RAEAASNTNA ISPISSLPTG TVPQTTAANQ PLPSLAPMLQ QVMPAVVSIN SKQVVRVRNP FFDDPILRRL FPEIPQERIN ESLGSGVIID ARNGYVLTNH HVIENADAVQ VTLADGRSFK AEFLGSDADT DIALIRIKAN KLTEIKLADS NKLRVGDFVV AIGNPFGFTQ TVTSGIVSAV GRSGILGLGY QNFIQTDASI NPGNSGGALV NLHGQLVGIN TASFNPQGSM AGNIGLGLAI PSNLARNVVE QLVTKGVVVR GTIGVQTQNI DARMAQSLGL SNPHGALVTR VLPNSAGAAA GLQPGDVILA ANDQRVDNAE TLHNYEGLQP VGSSVTLEVH RGGKPLKIRL TLKELPRTIA GETLDSRLSG AIFVDLPEFL RQSGIGGVMV NKVKHGSRAA ANGLVAGDVI IAAPIGEFSD LASWQASFSR PPQRLILRVL RGNAQYDALM R
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