Gene Xfasm12_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0250 
Symbol 
ID6119752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp290621 
End bp292066 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content55% 
IMG OID641648331 
Productheat shock protein 
Protein accessionYP_001774907 
Protein GI170729474 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACCGC TACCTACTTT ACTGACGCTA TCTATCGCTG CCGCATTCGG CGGTTTTGCA 
GCCACTGGGA TGAATGCTTG GCTTGACAAC CGCGCCGAAG CGGCATCCAA CACCAATGCT
ATCTCACCAA TATCATCACT GCCAACGGGC ACGGTGCCTC AAACCACAGC CGCCAACCAG
CCGCTACCAT CGTTAGCACC CATGCTGCAA CAAGTGATGC CAGCAGTGGT CAGCATCAAC
AGTAAACAAG TGGTACGGGT GCGCAATCCA TTTTTCGACG ACCCGATCCT ACGTCGGCTA
TTCCCAGAGA TCCCCCAAGA ACGCATTAAT GAGTCGCTCG GATCTGGGGT GATCATCGAC
GCGCGCAATG GCTACGTACT TACCAATCAT CATGTGATCG AAAATGCCGA CGCCGTGCAG
GTGACATTAG CAGATGGGCG CAGCTTCAAG GCCGAGTTCC TCGGTTCTGA CGCAGACACC
GACATCGCCT TGATCCGGAT AAAAGCAAAT AAACTGACCG AAATCAAACT CGCAGACAGT
AACAAATTAC GCGTGGGCGA CTTCGTCGTA GCCATTGGTA ACCCGTTCGG CTTTACCCAA
ACGGTGACCT CAGGCATCGT CTCGGCGGTA GGTCGCAGTG GCATCCTCGG CCTGGGTTAC
CAAAACTTCA TCCAAACCGA CGCATCGATC AACCCGGGTA ACTCAGGCGG CGCACTGGTG
AATCTTCATG GCCAGTTGGT TGGCATCAAC ACGGCCAGCT TCAACCCACA GGGCAGCATG
GCTGGCAACA TCGGCTTAGG CCTGGCGATT CCTTCGAATC TAGCGCGCAA CGTCGTCGAG
CAATTGGTCA CGAAAGGCGT TGTGGTACGC GGGACAATCG GCGTACAAAC ACAGAATATT
GATGCACGAA TGGCACAAAG CTTAGGCCTG AGTAATCCAC ACGGCGCATT AGTGACTCGC
GTATTACCCA ATTCCGCTGG TGCCGCAGCC GGACTGCAAC CAGGTGATGT GATCCTGGCA
GCCAATGACC AAAGGGTGGA CAACGCGGAA ACATTGCACA ACTACGAAGG ACTACAGCCC
GTCGGTAGCT CAGTAACACT GGAAGTACAC CGTGGCGGCA AGCCACTCAA AATACGCCTC
ACACTCAAAG AATTGCCACG CACAATCGCC GGAGAAACGC TGGATTCACG ACTGTCGGGC
GCCATCTTCG TTGACCTGCC AGAGTTCCTC CGTCAATCAG GAATCGGTGG AGTCATGGTC
AACAAAGTCA AACACGGCAG CCGCGCTGCG GCCAATGGGT TGGTAGCCGG AGATGTCATC
ATTGCCGCAC CCATCGGTGA ATTCTCTGAC TTGGCAAGCT GGCAGGCAAG CTTTTCCCGC
CCACCACAAC GGCTGATACT GCGTGTGCTG CGCGGTAACG CACAGTATGA TGCGCTGATG
CGCTGA
 
Protein sequence
MRPLPTLLTL SIAAAFGGFA ATGMNAWLDN RAEAASNTNA ISPISSLPTG TVPQTTAANQ 
PLPSLAPMLQ QVMPAVVSIN SKQVVRVRNP FFDDPILRRL FPEIPQERIN ESLGSGVIID
ARNGYVLTNH HVIENADAVQ VTLADGRSFK AEFLGSDADT DIALIRIKAN KLTEIKLADS
NKLRVGDFVV AIGNPFGFTQ TVTSGIVSAV GRSGILGLGY QNFIQTDASI NPGNSGGALV
NLHGQLVGIN TASFNPQGSM AGNIGLGLAI PSNLARNVVE QLVTKGVVVR GTIGVQTQNI
DARMAQSLGL SNPHGALVTR VLPNSAGAAA GLQPGDVILA ANDQRVDNAE TLHNYEGLQP
VGSSVTLEVH RGGKPLKIRL TLKELPRTIA GETLDSRLSG AIFVDLPEFL RQSGIGGVMV
NKVKHGSRAA ANGLVAGDVI IAAPIGEFSD LASWQASFSR PPQRLILRVL RGNAQYDALM
R