Gene Xfasm12_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0226 
Symbol 
ID6119728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp265151 
End bp265708 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID641648307 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001774883 
Protein GI170729450 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGTGA TTGATACGGC GCTGCCAGGC TGTTTGGTGA TTGAGCCGAG GGTGTTTGAT 
GATGCGCGCG GCGAATTTTT CGAGGCATGG AACGCGGAGT GTTTCGAGCG CCAGGGGATG 
TCATCGCGCT TTGTGCAGAG CAACGTGTCC ATATCAATGT ATGGTGTTTT GCGTGGTTTG 
CATTATCAGT GGCCGCGTCC GCAGGGGAAG TTGGTCGGTG TGTTGGAGGG TGAGGTTTAC 
GATGTTGCTG TTGATATCCG CCTTGGCTCG CCGCATTACG GGCGTTGGGT AGCGGTGTTG 
CTCAGTGCCA AAAACAAGCG CCAGTTATGG ATTCCGGAAG GGTTTGCGCA CGGGTTTGTG 
GTGTTGTCTG AGCGTGCGGT ATTCAACTAT CTGTGTACGG ATGTGTATGT GAAGGAAGCC 
GATGCCGGCA TCCGTTGGAA TGATGCGGTG CTTGGTGTGG ATTGGCCGAT TGCTACGCCG 
CTGCTCTCGG CTAAGGATCA GAAAGCGCCG TTTATGGAGG AAGTCCCTAT TGATCGTTTG 
CCGATATACG TGCCGTGA
 
Protein sequence
MKVIDTALPG CLVIEPRVFD DARGEFFEAW NAECFERQGM SSRFVQSNVS ISMYGVLRGL 
HYQWPRPQGK LVGVLEGEVY DVAVDIRLGS PHYGRWVAVL LSAKNKRQLW IPEGFAHGFV 
VLSERAVFNY LCTDVYVKEA DAGIRWNDAV LGVDWPIATP LLSAKDQKAP FMEEVPIDRL 
PIYVP