Gene Xfasm12_0201 details

Gene Information

• Locus tag: Xfasm12_0201
• ID: 6119703
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 240874
• End bp: 241521
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641648288
• Product: hypothetical protein
• Protein accession: YP_001774864
• Protein GI: 170729431
• COG category: [S] Function unknown
• COG ID: [COG0779] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.0967046
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATCATT TTTCAGCAGG ACGTAATTCA ATTGGATTAA GGCAATCTGT GAGTGACAAA 
GGCATTGAAA TTGTGAATCT GTTGGCGCCA AAGGTCGAGA TGCTTGGGTT CGACCTGCTT 
GGTGCTGAGT ATGTTCTTGT GCCAAGTGGC GCTATTTTGC GACTATACAT TGATATCCCG 
TTTGCTATGC AGCCAGAGTG CATGGTAAGC ATTGATGATT GTGAGCGCGT GAGCCGTGAG 
GTATCGGCGT ATTTAGACCT TGAAGAACCG ATCAGTGGCA ATTACACGTT GGAAGTGTCC 
TCCCCAGGTT TGGATCGCCG ACTGTTCACA TTGGAGCAAT TTGCCCGTCA CCATAACCAC 
CTTGTTAAGG TTGGATTGAA GTTGCAACAG CATGGATCTC GTCGCTTGCA GGGAAAGATT 
GTGCGTGTTG AGCAAGTGGG TGGTTTTGTT GTCTTGCTTG TCAATGGTGT TGAGCTGGCT 
GTGGATTTTA ACAACATTGA TAAGGCTCGG ATTGTCCCTG ACTGGAGCGC GCTAGGCTTG 
GCGCCGCTAG AAAAAAGTAA GCATGACACG AAAAAAATGA GTCAAGGCAA CAAAAAACCA 
TCCAACGAGT CGGCGGCACG GCAAGCCGTG CGTGGAGTGA TCAGATGA 

 

Protein sequence

MHHFSAGRNS IGLRQSVSDK GIEIVNLLAP KVEMLGFDLL GAEYVLVPSG AILRLYIDIP 
FAMQPECMVS IDDCERVSRE VSAYLDLEEP ISGNYTLEVS SPGLDRRLFT LEQFARHHNH 
LVKVGLKLQQ HGSRRLQGKI VRVEQVGGFV VLLVNGVELA VDFNNIDKAR IVPDWSALGL 
APLEKSKHDT KKMSQGNKKP SNESAARQAV RGVIR