Gene Xfasm12_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0189 
Symbol 
ID6121179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp224739 
End bp226565 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content56% 
IMG OID641648275 
Producthypothetical protein 
Protein accessionYP_001774853 
Protein GI170729420 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGA TCTGCACGCT TGCTGTCTCG CTGTTGTCTG TGGTGCTGCT GTCGGCGTGC 
AGTAGTTCTA GTTCACTTAG CAGGAGTGAT ACCCGTGATC GCCGTGTGAT TCCGTCCGAG
CAGGCGGCCC GTGCCTTCGA TCAGTTGCTC AATGAGCAGT GGCAGTACGA GCTTGCGCAT
AGTCCTGAGT TTGCCAGCAT CATCGGGGAT AAGCGGTACA ACGATCGTTG GAGTGACTAT
TCGTCTGCTG CAGTTGCTGC AGACCGTCAG GCGACTGTGG GGTTTTTGGC AAAGTTTCAG
AAGGTCAATG CGGCTGCGCT GGATGGGCAG CGCCAACTGA GTTTGATATT GATGCAGCGC
CAGTTGCAGG ACCATTTGGA GGCAATCCGG CTGAGGTTGC ACGAGATGCT GTTAGAGCCT
GTTGGCGGTG TTCATTTGGA ACTTGCCAGT GATGCCGACA TGTTCCCATT TGATGACATC
AAGGATTATC GGGATTACAT CAAGCGCTTG CAGCGGGTGC CTGCGCTGAT TGATCAGGTG
ATTGAGATTT CGCGCCAGGG TGCGCAGGAC GGTCTGACGC AGCCGCGTTA TCTATTGAAG
ACGCTCCCGG CACAGATTCG CAAGATTGCT GAGGCGGCGG GTGCCGACAG TCCATTCGCT
TCGCCATTGA AGACGCTTGA TCAAGTGGTC ACGGATGCAG CGCAGCGTGC GCAATTGCGT
GCGGCGCTGA TAACTGCGAT AGATCAGCAG GTACGTCCGG CGTATGAAAC GCTGGCTGCG
TTTGTGCAGA ACGAGTATGC GGCGAAGGGC CGTGAGCACG AGGGGCTATG GTCGTTGCCG
GATGGGGAGG CACGCTATCG TTTTGCAATT CACACGCAGA CCACCACTGA CCATTCTCCG
GAGGACATTC ATCGCATTGG TCTGCGTGAG GTTGCACGGA TTGAGGGTGA GATGACTGCA
ATCGCGATTT CAATCGGTTA CAAGGACTTG GCTAGCTTCC GCAAGGCGGT GGCGAGTGAT
AAGGCGCATT TTGCGGAGGA TGATGAGCAG ATCCTCGGCT TGTATCGTGG TTACATCGCT
GGCATGCATG TGGCGTTGCC TAAGCTGTTT GAGGATGGTG ATCTGCCGAA GACTCTGCTG
GAGGTGCGGG CAATGCCAGC GTTCCGCCGC GAGGCGCCCG GTGCCGAATA TTTGCAGGGC
ACTCCGGAAG GGAGCAAACC GGCTATTGTG ATGGTCAACA CCAACGATGC GATTGAGCGT
ACGTTGGTTA ATGTCGAGAC CACGGCCTAC CATGAGGGGG TGCCAGGGCA TCACTTGCAA
ATCTCGTTGG CGCAGAGGTT GCCACTGCCG CCGTTTCGGC AGCATGCGGG TTACAACGCG
TATGTTGAAG GATGGGCGTT GTACGCGGAG CGCTTGGGTA AGGAGGCCGG TTTCTTCAAA
GACCCTTACA GTGATTATGG GCGCTTAGCG GGTGAGCTAT TGCGCGCTAA TCGCTTGGTA
TTGGATACGG GGGTGCACTA TAAGCGCTGG ACGCGGCAGC AGATGGTCGA TTTTTTCCAT
GCGCACCCGT CCGATGATGA GCCGAGCATT CAGGCGGAGA CGGATCGTTA CATTGTCTGG
CCGGGGCAGG CGTTGGGCTA CAAGCTGGGT GAGATGCAGA TCCTAAGGTT GCGTGCTAAG
GCTGAGAAGG TGCTCGGTGC CCGGTTCGAT CTCCGAGCAT TTCATGATGT GGTGTTGGGG
GGTGGTGCGA TGCCTTTGGA TGTGTTGGCA CAGCGTATTG ATGCGTGGAT CGCTCAAGTC
CAAGGTGTGT CGCAGGCGAA GAGATGA
 
Protein sequence
MPSICTLAVS LLSVVLLSAC SSSSSLSRSD TRDRRVIPSE QAARAFDQLL NEQWQYELAH 
SPEFASIIGD KRYNDRWSDY SSAAVAADRQ ATVGFLAKFQ KVNAAALDGQ RQLSLILMQR
QLQDHLEAIR LRLHEMLLEP VGGVHLELAS DADMFPFDDI KDYRDYIKRL QRVPALIDQV
IEISRQGAQD GLTQPRYLLK TLPAQIRKIA EAAGADSPFA SPLKTLDQVV TDAAQRAQLR
AALITAIDQQ VRPAYETLAA FVQNEYAAKG REHEGLWSLP DGEARYRFAI HTQTTTDHSP
EDIHRIGLRE VARIEGEMTA IAISIGYKDL ASFRKAVASD KAHFAEDDEQ ILGLYRGYIA
GMHVALPKLF EDGDLPKTLL EVRAMPAFRR EAPGAEYLQG TPEGSKPAIV MVNTNDAIER
TLVNVETTAY HEGVPGHHLQ ISLAQRLPLP PFRQHAGYNA YVEGWALYAE RLGKEAGFFK
DPYSDYGRLA GELLRANRLV LDTGVHYKRW TRQQMVDFFH AHPSDDEPSI QAETDRYIVW
PGQALGYKLG EMQILRLRAK AEKVLGARFD LRAFHDVVLG GGAMPLDVLA QRIDAWIAQV
QGVSQAKR