Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0189 |
Symbol | |
ID | 6121179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 224739 |
End bp | 226565 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641648275 |
Product | hypothetical protein |
Protein accession | YP_001774853 |
Protein GI | 170729420 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCGA TCTGCACGCT TGCTGTCTCG CTGTTGTCTG TGGTGCTGCT GTCGGCGTGC AGTAGTTCTA GTTCACTTAG CAGGAGTGAT ACCCGTGATC GCCGTGTGAT TCCGTCCGAG CAGGCGGCCC GTGCCTTCGA TCAGTTGCTC AATGAGCAGT GGCAGTACGA GCTTGCGCAT AGTCCTGAGT TTGCCAGCAT CATCGGGGAT AAGCGGTACA ACGATCGTTG GAGTGACTAT TCGTCTGCTG CAGTTGCTGC AGACCGTCAG GCGACTGTGG GGTTTTTGGC AAAGTTTCAG AAGGTCAATG CGGCTGCGCT GGATGGGCAG CGCCAACTGA GTTTGATATT GATGCAGCGC CAGTTGCAGG ACCATTTGGA GGCAATCCGG CTGAGGTTGC ACGAGATGCT GTTAGAGCCT GTTGGCGGTG TTCATTTGGA ACTTGCCAGT GATGCCGACA TGTTCCCATT TGATGACATC AAGGATTATC GGGATTACAT CAAGCGCTTG CAGCGGGTGC CTGCGCTGAT TGATCAGGTG ATTGAGATTT CGCGCCAGGG TGCGCAGGAC GGTCTGACGC AGCCGCGTTA TCTATTGAAG ACGCTCCCGG CACAGATTCG CAAGATTGCT GAGGCGGCGG GTGCCGACAG TCCATTCGCT TCGCCATTGA AGACGCTTGA TCAAGTGGTC ACGGATGCAG CGCAGCGTGC GCAATTGCGT GCGGCGCTGA TAACTGCGAT AGATCAGCAG GTACGTCCGG CGTATGAAAC GCTGGCTGCG TTTGTGCAGA ACGAGTATGC GGCGAAGGGC CGTGAGCACG AGGGGCTATG GTCGTTGCCG GATGGGGAGG CACGCTATCG TTTTGCAATT CACACGCAGA CCACCACTGA CCATTCTCCG GAGGACATTC ATCGCATTGG TCTGCGTGAG GTTGCACGGA TTGAGGGTGA GATGACTGCA ATCGCGATTT CAATCGGTTA CAAGGACTTG GCTAGCTTCC GCAAGGCGGT GGCGAGTGAT AAGGCGCATT TTGCGGAGGA TGATGAGCAG ATCCTCGGCT TGTATCGTGG TTACATCGCT GGCATGCATG TGGCGTTGCC TAAGCTGTTT GAGGATGGTG ATCTGCCGAA GACTCTGCTG GAGGTGCGGG CAATGCCAGC GTTCCGCCGC GAGGCGCCCG GTGCCGAATA TTTGCAGGGC ACTCCGGAAG GGAGCAAACC GGCTATTGTG ATGGTCAACA CCAACGATGC GATTGAGCGT ACGTTGGTTA ATGTCGAGAC CACGGCCTAC CATGAGGGGG TGCCAGGGCA TCACTTGCAA ATCTCGTTGG CGCAGAGGTT GCCACTGCCG CCGTTTCGGC AGCATGCGGG TTACAACGCG TATGTTGAAG GATGGGCGTT GTACGCGGAG CGCTTGGGTA AGGAGGCCGG TTTCTTCAAA GACCCTTACA GTGATTATGG GCGCTTAGCG GGTGAGCTAT TGCGCGCTAA TCGCTTGGTA TTGGATACGG GGGTGCACTA TAAGCGCTGG ACGCGGCAGC AGATGGTCGA TTTTTTCCAT GCGCACCCGT CCGATGATGA GCCGAGCATT CAGGCGGAGA CGGATCGTTA CATTGTCTGG CCGGGGCAGG CGTTGGGCTA CAAGCTGGGT GAGATGCAGA TCCTAAGGTT GCGTGCTAAG GCTGAGAAGG TGCTCGGTGC CCGGTTCGAT CTCCGAGCAT TTCATGATGT GGTGTTGGGG GGTGGTGCGA TGCCTTTGGA TGTGTTGGCA CAGCGTATTG ATGCGTGGAT CGCTCAAGTC CAAGGTGTGT CGCAGGCGAA GAGATGA
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Protein sequence | MPSICTLAVS LLSVVLLSAC SSSSSLSRSD TRDRRVIPSE QAARAFDQLL NEQWQYELAH SPEFASIIGD KRYNDRWSDY SSAAVAADRQ ATVGFLAKFQ KVNAAALDGQ RQLSLILMQR QLQDHLEAIR LRLHEMLLEP VGGVHLELAS DADMFPFDDI KDYRDYIKRL QRVPALIDQV IEISRQGAQD GLTQPRYLLK TLPAQIRKIA EAAGADSPFA SPLKTLDQVV TDAAQRAQLR AALITAIDQQ VRPAYETLAA FVQNEYAAKG REHEGLWSLP DGEARYRFAI HTQTTTDHSP EDIHRIGLRE VARIEGEMTA IAISIGYKDL ASFRKAVASD KAHFAEDDEQ ILGLYRGYIA GMHVALPKLF EDGDLPKTLL EVRAMPAFRR EAPGAEYLQG TPEGSKPAIV MVNTNDAIER TLVNVETTAY HEGVPGHHLQ ISLAQRLPLP PFRQHAGYNA YVEGWALYAE RLGKEAGFFK DPYSDYGRLA GELLRANRLV LDTGVHYKRW TRQQMVDFFH AHPSDDEPSI QAETDRYIVW PGQALGYKLG EMQILRLRAK AEKVLGARFD LRAFHDVVLG GGAMPLDVLA QRIDAWIAQV QGVSQAKR
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