| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0174 |
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| Symbol | dnaE |
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| ID | 6121164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 207927 |
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| End bp | 211508 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648261 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001774840 |
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| Protein GI | 170729407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.224841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGT CTTCATTTGT TCATCTCCAT ATTCACACTG AATTCTCGTT AGCGGATTCA
ACGATTCGCG TGCCCGAGAA ACCAGAACAG GCTCACCCGA AAAAGGCCAA ACAAGCCAAC
CTACTCAGCA GAGCCGTTGA ACTCGGACTG CCAGCGCTGG CAGTAACGGA TCTGAACAAC
CTGTTCGCAC TGATTAAGTT CTATAAGGCC GCTGAAACCG TCGGCATTAA GCCGATCAGC
GGTGCTGATC TCCTCATCGC CGAACCAGAG CACACCCCGT GGGGAATGAC ATTGCTGTGT
CGGGATCACG CTGGCTACCT GAATCTATCG CAACTGATCA GCCGCGGTTG GCTGGAAGGT
CACCGCCCTG AAGGAGGAGT GGCCGTGCAC CCGGACTGGG TCCGTGACCA CCACAAAAAT
CTATTTGCCC TAATCGGACG TCACAGCCTG GTCGGACAGC TGTTCGCCAA AGGTCGCGCT
GATCTGGCCG AACAGCAACT GGCGGACTGG CAACGCGTAT TCGGTGACGG CTTGCACTTG
GAGCTCACAC GCACTGGACG CGATGGCGAA GAACCATTCA ATCAATTTGC ACTCCAAGTC
GCTGGCATCC GCGGCATACC GGTGATTGCC AGCAACGACG TTCGCTTCCT GGTACCAAGC
GACTTTCTGG CACACGAGGC GCGCGTCTGT ATCGCATCTG GACGCATGCT TGATGATCCC
AAGCGACCAC GCACTTACAG CGAACAACAG TATCTGCGTT CCTCCGAAGA GATGGCAGCA
CTCTTTACTG ACATCCCAGA CGCCTTGGAC AACACCCGCA CCCTGGCACA ACGCTGCAAT
ATCGAGATGC GGCTGGGGAC CTATTTCTTA CCTAACTACC CCGTTCCCAA CGACGAAACG
TTGGACAGTT GGATCCGCAA ACAGTCGCAT GAAGGTCTGG AAGCACGCCT ACTGAAACAT
CCATTAGCAC CAGGGCAGAC ACGCGAAGAC TACGTGACCC GTCTGGAATT TGAACTGGAC
ACCATCATCA AGATGGGGTT CTCCGGTTAC TTCCTCATCG TGGCCGACTT CATTCAATGG
GGTAAACAAC AGGGCATCCC CATCGGCCCG GGACGCGGCT CTGGTGCCGG CTCACTGGTC
GCGTGGGCGT TACTGATTAC TGACCTGGAC CCTCTGCCAT ACAACTTGTT GTTTGAACGC
TTTCTTAATC CCGAACGCGT ATCAATGCCG GATTTCGACA TCGACTTTTG TATGGAACGC
CGTGATGAGG TCATTAGCTA CGTCGCACGC AAATACGGTC GCGAACGGGT CAGTCAAATC
ATTACCTACG GCACCATGGC TGCGAAAGCA GTGGTGCGCG ACGTCGGCCG CGTATTGGGT
TTCCCATATG GCTTGGTCGA CAGCGTCGCT AAGCTGATCC CGAGCACCCT TGGCATCACC
CTGAAAGATG CGATGGGCGA AGGCGAGACC AACGACAACG CCTCAGCAGA ACTGATACAA
CGCTATCAAG CCGAGGAGGA CGTACAGGAA CTGCTCAACC TGGCACGTCA ACTGGAAGAT
CTGACCCGCA ATGCTGGCAA GCACGCCGGC GGTGTCGTGA TCGCACCGAA CCCACTCACT
GAATTCTGCC CACTCTTTGC AGAACACGAC GAAAACGGAC GCGGGAAGAA CCCCGTCACC
CAATTCGACA AAAACGACGT GGAAGAAGTC GGCTTAGTGA AATTCGACTT CCTCGGCCTA
CGCACACTCA CCATCATTGA TTGGGCGGTC AAGGCAATCA ACAAACGCCA CGCCCGCGCC
TGTATTGATC CGGTGGACAT CACCGCACTT CCACTGGACG ACCTCCCAAC TTACAAAGAC
ATTTTTGCAT CAGGGAACAC GAGCGCAGTA TTCCAATTTG AATCCTCGGG CATGCGCCGC
CTCCTCAAAG ATGCACGCCC AGACCGCTTC GAAGATCTCA TCGCACTGGT GTCACTGTAT
CGACCAGGCC CTATGGACTT GATCCCGGAA TTCACCGCGC GCAAGCACGG AGTGCAAGAG
ACCATCTATC CCGACCCGCG TACGAAGAAC ATTCTTAAAG ACACCTACGG GATCATGGTG
TACCAGGAAC AAGTGATGCA AATGGCCCAG ATTGTCGGCG GTTACTCGCT GGGCAGCGCT
GACCTGCTAC GTCGCGCAAT GGGTAAAAAA GTACCTGCCG AGATGGCCAA GCACCGCGAG
ATCTTCCGCG AGGGTGCCGC CAAAGGTGGC ATGGACGCGG TCAAAGCCGA TGAAATCTTC
GACCTCATGG AGAAATTTGC CGGCTATGGT TTTAATAAAT CCCACGCAGC TGCATACGCG
CTGGTCAGCT ATCAAACCGC TTGGCTCAAG CGCCATTATC CTGCTGAATT CATGGCAGCC
ACGCTGTCCT CAGACATGGA CAACACCGAC AAAGTCGTCG GCTTCCTCGA CGAGGCACGT
AACCTCAATC TGAAGGTGCT GCGACCAAAC ATCAATCACT CAGCCTACAT GTTCGAGGCA
ACTCACGCCG ACACAATCCA ATACGGCCTG GGCGCTATTA AAGGTGTCGG CCAAAGCGTC
TGCGAGGCAA TCGTCAAAGA AAGGTTGCAC TACGGTCCGT ATACGTCACT GCTCGATTTC
TGTACCCGGG TCACCTCAGC CAAACTCAAC CGACGTGCAC TCGAAGCAAT GATCCATGCT
GGCGCACTGG ACGAGCTAGG TAAAAATCGC GCCTCGGTCA TGCTGCAACT GCCAGAAGTC
ATCAAAGCAA CGGAACAAAT GTCCAGAGAA CGCGAGTCCG GGCAAAACTC GCTTTTCGGC
AACGCAGACC CCGGCACACC AGCCATCCAA TTAGATCTTC CAGAATGCGA AGAATGGCCG
CTAACACGCA TGTTGAACGG AGAACGGGAG ACGCTGGGCC TTTATTTCAG CGGCCACCCA
TTCGACCCAT ACCGTAAGCA AGTGAAGGAA CTTGTTGGTT GCGATCTAAA CACCAGTGCG
CTTGAAAGAA TCCTGAGTTC CCAACAACGC GGCAACGGTG AAAAGCGTAC TTGGCAGCCA
GAGGTGAACA CCATTCTCGC AGGATTGGTC GTCAGTATGC GCCGTAAGGG AGACAGCCAA
GTATTTGTAC AACTTGAAGA CGGACGCGGT CGAATTGAAT GCAGTGCGTT CTCCGACGCC
CTGGCAGAGT TCGGCCACCT GTTGACCCGT GACCGCATAC TGATTGTCAA AGGTGGTCTG
CGAGAAGATG AATTCAACGG CGGCTACAGC CTACGGATCC GTCAATGCTG GGATTACGCG
CAACTCTGTA CAGACTATGC GCAACGCTTG TTGCTACGCG TGGACCTACG CACCTCTCAC
GCATGGGAAA GAATCGATGC CATCCTGGCA CGCTATCGCC CCGGCAACAC CCCATTACGT
CTCGATCTGT TGCTGAATTC AACCCACGGC CCCGTCGCCG GCACGCTCGA CTTGAGTGGC
GGCCAATCTG TACGTATCGA ACAATCACTC TTGGATAAAC TGCAAAAAGA TCCCGCCGTA
TCTACGCTTA AGGTCAAATA CACGCCACCT TGGGTGCAAT GA
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| Protein sequence | MSTSSFVHLH IHTEFSLADS TIRVPEKPEQ AHPKKAKQAN LLSRAVELGL PALAVTDLNN
LFALIKFYKA AETVGIKPIS GADLLIAEPE HTPWGMTLLC RDHAGYLNLS QLISRGWLEG
HRPEGGVAVH PDWVRDHHKN LFALIGRHSL VGQLFAKGRA DLAEQQLADW QRVFGDGLHL
ELTRTGRDGE EPFNQFALQV AGIRGIPVIA SNDVRFLVPS DFLAHEARVC IASGRMLDDP
KRPRTYSEQQ YLRSSEEMAA LFTDIPDALD NTRTLAQRCN IEMRLGTYFL PNYPVPNDET
LDSWIRKQSH EGLEARLLKH PLAPGQTRED YVTRLEFELD TIIKMGFSGY FLIVADFIQW
GKQQGIPIGP GRGSGAGSLV AWALLITDLD PLPYNLLFER FLNPERVSMP DFDIDFCMER
RDEVISYVAR KYGRERVSQI ITYGTMAAKA VVRDVGRVLG FPYGLVDSVA KLIPSTLGIT
LKDAMGEGET NDNASAELIQ RYQAEEDVQE LLNLARQLED LTRNAGKHAG GVVIAPNPLT
EFCPLFAEHD ENGRGKNPVT QFDKNDVEEV GLVKFDFLGL RTLTIIDWAV KAINKRHARA
CIDPVDITAL PLDDLPTYKD IFASGNTSAV FQFESSGMRR LLKDARPDRF EDLIALVSLY
RPGPMDLIPE FTARKHGVQE TIYPDPRTKN ILKDTYGIMV YQEQVMQMAQ IVGGYSLGSA
DLLRRAMGKK VPAEMAKHRE IFREGAAKGG MDAVKADEIF DLMEKFAGYG FNKSHAAAYA
LVSYQTAWLK RHYPAEFMAA TLSSDMDNTD KVVGFLDEAR NLNLKVLRPN INHSAYMFEA
THADTIQYGL GAIKGVGQSV CEAIVKERLH YGPYTSLLDF CTRVTSAKLN RRALEAMIHA
GALDELGKNR ASVMLQLPEV IKATEQMSRE RESGQNSLFG NADPGTPAIQ LDLPECEEWP
LTRMLNGERE TLGLYFSGHP FDPYRKQVKE LVGCDLNTSA LERILSSQQR GNGEKRTWQP
EVNTILAGLV VSMRRKGDSQ VFVQLEDGRG RIECSAFSDA LAEFGHLLTR DRILIVKGGL
REDEFNGGYS LRIRQCWDYA QLCTDYAQRL LLRVDLRTSH AWERIDAILA RYRPGNTPLR
LDLLLNSTHG PVAGTLDLSG GQSVRIEQSL LDKLQKDPAV STLKVKYTPP WVQ
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