Gene Xfasm12_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0172 
Symbol 
ID6121162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp206255 
End bp206707 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content55% 
IMG OID641648259 
Producthypothetical protein 
Protein accessionYP_001774838 
Protein GI170729405 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.445067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTGT ATTTTTGGGT CAAGACTTTC CATCTACTGT TTGTGATTGC TTGGATGGCT 
GCTGTCTTCT ATCTGCCGCG TATCTTGGTC AATGTTGCTG AAACCGATGG TCAGCCGGCG
GTGCAGGCAC GCCTGAGGCA GATGGGGCGG CGTTTGTACA TCTTTGGACA CATCATGTTT
GGGTTGAGTG GCTTACTTGG TGTGTTGTTG TGGTTGGGGT ATCGGGTGAT TCCCGCATTT
CCGACGATGG TAGGAGACGG CAGCGGTTGG CTGCATGCCA AGGTTGGGTT GGTCGTATTA
ATCCTGGTGC ATTACATCGT GGCTGGGTAC TGGCTTAAGC GGGCCGAGTG TGGCGGCGTG
CTGCCCGGGG CAGGTGCGCT GCGCGTGTTC AATGAAATCC CGGTGCTTGT GCTGGTCGGC
ATCCTTTGGT TGGTGTTTGC CAAGCCTTTT TGA
 
Protein sequence
MALYFWVKTF HLLFVIAWMA AVFYLPRILV NVAETDGQPA VQARLRQMGR RLYIFGHIMF 
GLSGLLGVLL WLGYRVIPAF PTMVGDGSGW LHAKVGLVVL ILVHYIVAGY WLKRAECGGV
LPGAGALRVF NEIPVLVLVG ILWLVFAKPF