Gene Xfasm12_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0157 
Symbol 
ID6121147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp192105 
End bp193061 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content51% 
IMG OID641648245 
Productinner membrane protein 
Protein accessionYP_001774824 
Protein GI170729391 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.131876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACCAA GTAATGTATT GGCGTTCATT GTGCTGGTCG CCGGCGTCAT CCTGTTATTC 
AAATCCGTCA TCATGGTGCC GCAAGGTTAT GAGTGGACCG TAGAGAAATT CGGTCGTTAC
ACACACACCA TGAAACCGGG CCTCCATTTC TTGATTCCTC TTATCTACAG CGTCGGACGC
AAAGTCAGCA TGATGGAACA GGTACTGGCT GTACCGAGTC AAGAAGTCAT CACCAAAGAT
AACGCGGGAG TACGCGTAGA CGGGGTGGTA TTTTTCCAGG TGCTCGACGC AGCCAAAGCT
GCCTACGAGG TTGCCAACCT AGAAATTGCA ATGATCGCAC TGGTACAGAC CAACATCCGC
ACCGTCGTTG GCTCGATAGA CTTCGACGAA TCATTAAGTC AACGCGAAAC AATCAACGCC
AAACTATTGA GCGTCGTCGA GCACGCAACC AGCCCGTGGG GAGTGAAGGT CACTCGTATC
GATATCAAAG ACATTCAGCC ACCGCATAAT CTAGCCGAGT CGATGCAACA ACAAAAGATG
GCTGAACAAA CCAGGCGTGC AACCATCCTA GAAGCGGAGG GAGTACGCCA ATCCGCAATC
CTGCGTGCCG ATGGTGAGAA GCAAGCCGCC GTAATGGAAG CCGAAGGCCG CAAGGAAGCC
GCGTTCCGTG ATGCAGAAGC GCGTGAGCGC TTAGCAGAAG CAGAAGCCAA AGCAACCCGG
ATACTTTCAG AAGCCATCTC GCAGGGTAAC GTACAAGCAG TCAACTACTT TGTTGCACAA
AAATACGTTG AAGCGTTCAA AGAACTGGCC ACTGCTCCCA ACCAGAAATT CATTCTAATG
CCAATGGAAA CCTCAGGTAT CATCGGCTCA ATCGCTGGCA TTGCCGACTT GACCAGAGAA
GCATTAGGTA AATCGGATCA TAGTGCGACA CCGTCTCAAC GACCACACCG AGGCTGA
 
Protein sequence
MLPSNVLAFI VLVAGVILLF KSVIMVPQGY EWTVEKFGRY THTMKPGLHF LIPLIYSVGR 
KVSMMEQVLA VPSQEVITKD NAGVRVDGVV FFQVLDAAKA AYEVANLEIA MIALVQTNIR
TVVGSIDFDE SLSQRETINA KLLSVVEHAT SPWGVKVTRI DIKDIQPPHN LAESMQQQKM
AEQTRRATIL EAEGVRQSAI LRADGEKQAA VMEAEGRKEA AFRDAEARER LAEAEAKATR
ILSEAISQGN VQAVNYFVAQ KYVEAFKELA TAPNQKFILM PMETSGIIGS IAGIADLTRE
ALGKSDHSAT PSQRPHRG