Gene Xfasm12_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0144 
Symbol 
ID6121134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp176207 
End bp177004 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content49% 
IMG OID641648232 
Producthypothetical protein 
Protein accessionYP_001774811 
Protein GI170729378 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.772264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTTT GTGAGTTGTT ATTTAATGAT ATTTCCCGCA GAGGTGAGTG GCGTATTCCG 
GGGCTGGTGG GTCTATTAGC TCACGGCGGT TATCATTTTT TGGTGGTATT AGGCAATGCT
GGTGCTGTGG ACATGCATTT TTTCTCTGTT CTTTCTATGA CGTTTTTTGT GATGTCTGGC
TTGACAATTT TATTTAGTAC GCATGTGGGG ATGGGGACGG TGGGTGTGGT GGTGTTCCCT
CTGGCGGGGT TATTGCTTGC TGTTTATCAC GGTTACGGTC ACTCACCCAG CCCGGAGCTG
GGTTGGCGTG TAGAGCTGCA TGCTTGTCTA GCGTTACTAG GCTATGCGAC GTTAGGCATA
GCAGCACTAT TGGCGATGAT GTTGTGGTTT CGGGAACGTG CGTTGCGGCG ACGCAATGTT
CACCACTGGC GTGGTGCTCT GCCGCCGCTG ACTGAGTTAG AGAAGCTGCT TTTCCGCACG
ATCACGTTTG GTTTCATCCT GTTGACCTTC ACTGTATTCA CTGGTTTTTT GTTTGTGAGA
GATTTTCTGG AACAGAAGTT GTTGCATAAG AGTGTGCTAA GTGTTCTGTC CTGGGTGATA
TTTGGAGGGT TGTTAATTGG ACGCTGGCGG TATGGCTGGC GAGGCATCAA GGCGGTGCAC
TGGACATTAA CAGCGATGAT GTTTTTAGTA CTGGCGTTTT TTGGGAGCAA ACTGATGATT
GAGCTCATGC TACGTCACCA AAGCAGTTCA GTATCACCCG TCAGGCACGC GTCATACGGA
GAGCAAGGAT TGAGATAA
 
Protein sequence
MLFCELLFND ISRRGEWRIP GLVGLLAHGG YHFLVVLGNA GAVDMHFFSV LSMTFFVMSG 
LTILFSTHVG MGTVGVVVFP LAGLLLAVYH GYGHSPSPEL GWRVELHACL ALLGYATLGI
AALLAMMLWF RERALRRRNV HHWRGALPPL TELEKLLFRT ITFGFILLTF TVFTGFLFVR
DFLEQKLLHK SVLSVLSWVI FGGLLIGRWR YGWRGIKAVH WTLTAMMFLV LAFFGSKLMI
ELMLRHQSSS VSPVRHASYG EQGLR