| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0143 |
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| Symbol | |
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| ID | 6121133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 175257 |
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| End bp | 176072 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641648231 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001774810 |
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| Protein GI | 170729377 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.497786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAC TCCCAGAAGT CGAAACCACA TTGCGTGGAC TGTTGCCCTA TTTGACCAAT
CAACTGATCT ATTCTCTTAC CCTGCGTAGG CGTACCTTGC GCTGGGATAT CCCTTCCCAT
ATCGAAAGTC GTCTCCCAGG GCATCGCATC ACTACTGTGT GTCGTCGGGC CAAATACTTG
CTGATCGATA CTAATGCAGG GGGAAGTCTC ATCATCCACC TTGGCATGTC CGGTACTCTG
CGCTTACTGG CGCCAGAAAC GCCTCTACGC CCACACGATC ATGTGGACAT TATGTTGAAT
AACCGTCGTG TGCTACGGTT CAACGACCCT CGCCGCTTCG GATGCTTGCT CTGGCAAGAA
GATGGACAAA TCCACCCTCT CCTACAGCGC CTCGGCTGCG AACCACTCTC AGATAGTTTT
AATGGTGATT ATCTTTATCA GTGCAGCCGT GCTCGCAATG TGTCCGTGAA AACGTTTCTC
ATGGACCAAC GCATCGTGGT CGGTGTCGGT AATATCTATG CTGCTGAAAG TTTGTTCCGT
GCCGGTATCA GCCCTCTATG CGAAGCTGAC AAAATATCCC TCCAACGCTA TCGGCGCTTG
GCTGAAGTGG TCAAGGATAT CCTCCTATAT GCCATCAACC GGGGAGGAAC TACCTTGCGG
GATTTCCTCA GTCCCGATGG ACGCCCCGGT TACTTCAAGC AGGAATTGTT TGTCTACGGT
CGTCAGCAAC AGCCCTGTAA GCAGTGTGGA AGCCTCCTGC GTCAAACCAC CATCAGACAG
CGAACTACTG TCTGGTGCGG CCACTGCCAA GGTTGA
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| Protein sequence | MPELPEVETT LRGLLPYLTN QLIYSLTLRR RTLRWDIPSH IESRLPGHRI TTVCRRAKYL
LIDTNAGGSL IIHLGMSGTL RLLAPETPLR PHDHVDIMLN NRRVLRFNDP RRFGCLLWQE
DGQIHPLLQR LGCEPLSDSF NGDYLYQCSR ARNVSVKTFL MDQRIVVGVG NIYAAESLFR
AGISPLCEAD KISLQRYRRL AEVVKDILLY AINRGGTTLR DFLSPDGRPG YFKQELFVYG
RQQQPCKQCG SLLRQTTIRQ RTTVWCGHCQ G
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