Gene Xfasm12_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0115 
Symbol 
ID6119826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp135763 
End bp136848 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID641648200 
Producthypothetical protein 
Protein accessionYP_001774784 
Protein GI170729351 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.596493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGC TAGACCGCTA TCTGTTGAGC GATTTTACTC AGAGTTTCAT TGCAACTTTG 
ATTGTGCTGA TGCTGGTTGG GGTGGGTGGT GTGTTGGTCG ATATTCTGGG GAGCATTGCC
GATGGCCATT TTCCGGCCAA GCTGCTGTTG TCCCAGCTTG GCCTGCGGTT CATTAGTTAT
CTTCCGCTGC TCTTGCCGCT GGCGTTGATG TTGGGGTTGC TGTTGTCGCT AGGCCGGTTG
TATCGGGATT CGGAGATGGC GGTCATCACT TCAATTGGTG TTGGCCCTGG GCGGATGTTG
CCGTCAATTC TGGGGTTGGT GTTGCCTGTG GTCGTGCTGA TCGGTGTGTG TTCGTTGTGG
TTGGCGCCTT GGGCCAATCG CACCGCCAAT GATCTGCTGG AGCAGGCCAA TCGCAGCATT
ATCATGGCGG GTCTTGAAGC GGGGACGTTT ACTCCGATGC CTGATGGGGG TGTGGTTTAT
TTATCTTCGC TTTCCTCTGA TGGTACGAAG CTCAATGCGG TGTTCATGCA AAGTCAGAAG
GACGACCGGA TAGCGGTTGT CACTGCTAAG CGTGGTGAGA TGTATGTGCA GGGGGATAAG
GGGCGTTATT TGCGTCTGGA GGATGGGCAA CGCGTGGATG GGCCTGCCGA TGGTGCTGCG
CTGAATTACC GTGTGCTGAC TTTTGCGCGC AATGATGCGT TGTTGCCTGA GCTGTCCGTG
GTGTATGACA GCAATCATCC CGACATTCTA CCCACGTTCA ATTTGATCGG TGATCCGCGT
CGCGAGGCGC AGGCGCAGTT GCATGCACGG CTTGCGCCTC CATTGTTGGC ATTGGCATTT
GCGTTGTTGG TATTGCCGCT ATCGCGCAGT GCTCCGCGTC AGCAACGCTA TGGGGCTGTC
ATGATGTGTT TCTTGGTCTA CATGGTGGGC ACCAATCTGA TGATTGTCGG TACTCAGTGG
ATCGCCAACG GCAAGATTTC TCCTGTGTGG GGCTTGTGGT GGCTGACGTT GCCGCTGCTG
TTGGTGGCAG TATGGTTGTA TGCCCGCGGT GGCTGCTGGA TGCCGTGGCC GCGGAGAAGC
CGATGA
 
Protein sequence
MPKLDRYLLS DFTQSFIATL IVLMLVGVGG VLVDILGSIA DGHFPAKLLL SQLGLRFISY 
LPLLLPLALM LGLLLSLGRL YRDSEMAVIT SIGVGPGRML PSILGLVLPV VVLIGVCSLW
LAPWANRTAN DLLEQANRSI IMAGLEAGTF TPMPDGGVVY LSSLSSDGTK LNAVFMQSQK
DDRIAVVTAK RGEMYVQGDK GRYLRLEDGQ RVDGPADGAA LNYRVLTFAR NDALLPELSV
VYDSNHPDIL PTFNLIGDPR REAQAQLHAR LAPPLLALAF ALLVLPLSRS APRQQRYGAV
MMCFLVYMVG TNLMIVGTQW IANGKISPVW GLWWLTLPLL LVAVWLYARG GCWMPWPRRS
R