| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0102 |
|---|
| Symbol | |
|---|
| ID | 6119812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 121541 |
|---|
| End bp | 121756 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641648187 |
|---|
| Product | carbon storage regulator |
|---|
| Protein accession | YP_001774772 |
|---|
| Protein GI | 170729339 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCC TGACTCGTCG TTCTGGTGAA ACGTTGATGA TAGGTGATCA GGTCACCGTA
ACGGTGCTTG GTGTAAAGGG TAACCAAGTG CGTGTTGGTA TCAATGCTCC TAAGCATGTG
GCAGTGCATC GTGAAGAGAT CTATCATCGT ATCCAGCGTG GTGACGAGCT TGCGTGTTCT
TCTGGAACGC GGGGAGATAG CGGCTCTTCC ATATAA
|
|---|
| Protein sequence | MLILTRRSGE TLMIGDQVTV TVLGVKGNQV RVGINAPKHV AVHREEIYHR IQRGDELACS
SGTRGDSGSS I
|
|---|
| |