| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0101 |
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| Symbol | alaS |
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| ID | 6119811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 118748 |
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| End bp | 121402 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648186 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001774771 |
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| Protein GI | 170729338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAC CTACCAAATT CACCACTTCA AAGATTCGTA GCGATTTTCT AGAATTTTTC
AAGAATAAAG GCCACAAAAT CGTGCCTTCC GCGCCGTTGG TTCCAGGCAA CGATCCGACC
TTGCTGTTCA CTAATTCCGG GATGGTCCAG TTCAAGGACG TGTTTCTAGG GGCAGAGAAG
CGCAGTGAGG TCCGTGTGGC TGATGTGCAA TGCTGCTTAC GTGCCGGTGG TAAGCACAAT
GACCTGGATT CGGTTGGTTA CACAGCACGT CATCACACTT TCTTTGAGAT GCTCGGTAAT
TGGTCGTTTG GTGATTATTT TAAGAAGGAA GCGATCACGT GGGCTTGGGA GTTGTTGACC
CATGTTTGGG AGTTGCCCCC CGAACGTCTG TTGGTGACGG TGTACCGCAC TGACGATGAG
TCCTACGCAT TGTGGCGTGA CATGGTGGGT GTGCCGGAAG ATCGAATCGT CCGTATTGGC
GATAACAAAG GTGCGCCGTT TGCCTCGGAT AATTTCTGGC AAATGGCCGA TACCGGCCCG
TGTGGTCCAT GCACCGAGAT CTTCTACGAT CATGGGGAGC ACATCCCAGG GGGGCCTCCT
GGTTCCCCGG GTGAAGATGG AGATCGTTTC ATTGAGATAT GGAATTTGGT GTTCATGCAG
TTTGATCGTC AGTCTGACGG TACGTTGGTG CCTCTGCCGA CGCCCTGTGT GGATACAGGA
ATGGGCTTGG AGCGTTTGGC GGCGATCCTG CAGCATGTAC ACACTAACTA TGAGATTGAT
TTATTTCAGA CCCTGATCCT CAAGGCCGCC GAATTAACTG CTGTTGCGGA CGTGCAAAAC
AAATCGTTGT GCGTGATTGC TGACCATAGT CGTGCGTGTG CATTTTTGAT CGTCGATGGG
GTGCTTCCGT CCAATGAAGG CCGCGGTTAT GTCTTACGTC GGATCATCCG CCGTGCGCTG
CGTCATGGTT GGATGTTGGG GGTACGTCAA CCGTTCTTCA ACAACATGGT GCCAACCTTG
GTTGCGGTGA TGGGCGATGC TTATCCCAAG CTACAGGCTG CAGCTGAATC GGTGATGCGT
ACTCTCCTGG CTGAGGAAGA GCGTTTTGCC GAGACTTTGG ATGTCGGGAT GAAGATCTTT
AACGAGGTGG CTGCCAAGGT TGCCAATGGT GTGATCCCGG GTAGCGATGC GTTCCGTTTA
TACGATACCT ATGGTTTTCC TGTTGATTTG ACCGCTGATA TTGCGCGTGA GCGTGGTATG
AGGGTGGACA TGGCCGGTTT CGAAGCTGCA ATGACGCAAC AGCGCAAGAC TGCGCGCGCC
GCGGGTAAGT TTGGGCGCGG CGTGCAATTG TCTGCTGAAC GGGCCGCGAT GTTGTCACCC
ACGGTGTTCC TGGGCTATGA GCAGCTTCAG GCCGATGGCC TGAGAGTGGT TGCGTTGTTG
TCTGATGGTG GACTAACTGA TTCGGCGTCG GTGGGTGATG AGGTGATTGT GTTGACCGAC
CGTACACCTT TTTACGCTGA GTCTGGTGGT CAAGTGGGTG ATATTGGAAC GTTGATGGCA
TCCGACGGAG TTCGTCTGGA GGTGACTGAT ACGCAAAAGT TAATGGGTCA GTTCCACGGA
CATGTTACTC GTATTGTGCA AGGTGGGGTG AAGGTCGGCG ATGTGTTGTC CGGTAGCGTT
GCTGTTGCCA GACGAAAAAT GGTTGCTCTT AACCATTCAG CCACTCACCT GTTGCACTGC
GCGCTGCGCA GCGTGTTTGG TACTCACGTG GCGCAAAAAG GTTCTTTGGT TGCGCCGGAT
CGCCTGCGTT TCGACTTTTC ACATTTTGAG CCTATCTCGG CTGCACAAAT GACATTAATT
GAACGGATGG TCAACGATGA GGTGCGTGCT AATCATCTGG TGATGATCGA GCAGATGGGG
ATGCAGGCTG CGTTGGATGC TGGTGCGATG GCGCTATTTG GAGAGAAATA TGGAGAGCAT
GTGCGCGTAG TAAAGATGGG CACTTCGGTC GAACTCTGCG GTGGTACCCA TATCACCCGT
ACGGGTGACA TCGGTTTGTT TAAGATCATT TCCGAGTGTG GCGTGTCCTC TGGAGTGCGT
CGTATTGAGG CTGTGACGGG CGAAAGCGCG TTAAATCATG TCTTGGCCGA AGAGCATCGT
TTGTACGAAG TGGCTGGCCT TATTGGTAGT AACGCGAACG ATGTGGTCAA TCATATTCGC
CAACTCACTG ATCGTCAGAA GACATTGGAG CGTGAACTCG AGAAGCTCAA AGGAAAGCTG
ATCTCCGGAA CGATTACCGA TTTGCTCAGC ACGGCGGTCA ATGTGGCCGA TGTAAAAGTA
GTCGCCGCGC GTCTTGATGG TTTGGATGGG AAGGCGCTAC GTGAGGCGCT TGATCGACTT
AAATTGCAGC TGAGTGATGC CGTAATAGTC CTTGCGGGGG TGACTGGCGG CAAGGTGGCT
TTGGTGACTG CGGTCAATGG TCCTCGCGCA ATGGGTAAGG TGAAGGCCGA TACATTACTT
TCGCACGTTG CTACTCAAAT CAATGGCAGG GGAGGTGGCC GTGTTGATTT TGCTCAGGGC
GGCGGTGAGG ATGGACCTTC TCTTCGTTCC GCTCTTGACG GTGTTGCTAC GTGGGTCAAG
CAGCATCTGG ACTGA
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| Protein sequence | MNIPTKFTTS KIRSDFLEFF KNKGHKIVPS APLVPGNDPT LLFTNSGMVQ FKDVFLGAEK
RSEVRVADVQ CCLRAGGKHN DLDSVGYTAR HHTFFEMLGN WSFGDYFKKE AITWAWELLT
HVWELPPERL LVTVYRTDDE SYALWRDMVG VPEDRIVRIG DNKGAPFASD NFWQMADTGP
CGPCTEIFYD HGEHIPGGPP GSPGEDGDRF IEIWNLVFMQ FDRQSDGTLV PLPTPCVDTG
MGLERLAAIL QHVHTNYEID LFQTLILKAA ELTAVADVQN KSLCVIADHS RACAFLIVDG
VLPSNEGRGY VLRRIIRRAL RHGWMLGVRQ PFFNNMVPTL VAVMGDAYPK LQAAAESVMR
TLLAEEERFA ETLDVGMKIF NEVAAKVANG VIPGSDAFRL YDTYGFPVDL TADIARERGM
RVDMAGFEAA MTQQRKTARA AGKFGRGVQL SAERAAMLSP TVFLGYEQLQ ADGLRVVALL
SDGGLTDSAS VGDEVIVLTD RTPFYAESGG QVGDIGTLMA SDGVRLEVTD TQKLMGQFHG
HVTRIVQGGV KVGDVLSGSV AVARRKMVAL NHSATHLLHC ALRSVFGTHV AQKGSLVAPD
RLRFDFSHFE PISAAQMTLI ERMVNDEVRA NHLVMIEQMG MQAALDAGAM ALFGEKYGEH
VRVVKMGTSV ELCGGTHITR TGDIGLFKII SECGVSSGVR RIEAVTGESA LNHVLAEEHR
LYEVAGLIGS NANDVVNHIR QLTDRQKTLE RELEKLKGKL ISGTITDLLS TAVNVADVKV
VAARLDGLDG KALREALDRL KLQLSDAVIV LAGVTGGKVA LVTAVNGPRA MGKVKADTLL
SHVATQINGR GGGRVDFAQG GGEDGPSLRS ALDGVATWVK QHLD
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