Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0099 |
Symbol | |
ID | 6119809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 116399 |
End bp | 117034 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641648184 |
Product | LexA repressor |
Protein accession | YP_001774769 |
Protein GI | 170729336 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTTGA GCGATATTCA GCAGGCAATC CTGTCATTGA TTACCAACCA CATCAACGCT GATGGCGTTT CTCCTTCGCA GACGGAGATC GCGCGTGCAT TCGGCTTCAA AGGGGTTCGC GCGGTGCAGC ATCACCTTGA TGTATTGGAG CAACAGGGGA TGATTCGCCG CGTCCCTGGA CAAGCGCGTG GCATCCGGTT GAAGCATCTT ACTCAGGTGG ATGAGGCTGC GTTAGCTTTG CAGAGTGAGG ATGTGTTGCG CTTGCCAGTG CTCGGCCGCG TTGCGGCTGG TCAGCCGATC GGTGCTGATA TCGGTGAGGA TCGCGTGGTG TTGTTGGATC GTGTGTTCTT CTCCCCAGCA CCGGATTATC TGTTGAGGGT GCAAGGTGAT TCGATGCGCG ATGAAGGAAT TTTCGATGGT GATTTGATCG GCGTACATCG TACGCATGAT GCGCATTCTG GACAAATTGT GGTGGCGCGC ATTGATGATG AGATTACCGT CAAATTGTTG AAGATTAGTA AAGACCGGAT TCGTTTGCTA CCGCGTAATC CTGACTTTGC ACCGATTGAG GTGAGGTCAG ATCAGGATTT CGCCATTGAG GGATTGTATT GCGGCTTGCT GCGCCCCAAC CGGTGA
|
Protein sequence | MSLSDIQQAI LSLITNHINA DGVSPSQTEI ARAFGFKGVR AVQHHLDVLE QQGMIRRVPG QARGIRLKHL TQVDEAALAL QSEDVLRLPV LGRVAAGQPI GADIGEDRVV LLDRVFFSPA PDYLLRVQGD SMRDEGIFDG DLIGVHRTHD AHSGQIVVAR IDDEITVKLL KISKDRIRLL PRNPDFAPIE VRSDQDFAIE GLYCGLLRPN R
|
| |