| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0089 |
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| Symbol | trmD |
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| ID | 6119799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 105119 |
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| End bp | 105985 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641648174 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001774759 |
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| Protein GI | 170729326 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGC CAGTTCTGTC CCGTCTTGCC GGATACTGCT TCACCACAGC ATCCCTCATC
CAATCCGGTT TCAGATATCC CGCTTGCATG CGTATTGACG TTATCAGCTT GTTCCCCGAG
TTCATTACAC AGTGTGTCGG GTTTGGCGTG ATCGGTAGAG CACAGGAACG TGGTTTGCTT
GATTTACACA ACTGGAATCC ACGCGACTAT GCTCAAGGAA ATTACCGGCG TGTCGATGAT
CGTCCGTTCG GTGGTGGTCC AGGGATGGTG ATGTTGATCG AGCCACTGCG TGCCTGCCTT
GAAGCAGTAC GGGCAGCAGA TCCTCAACCA GCGCCCTTGA TTTATCTCAG TCCGCAAGGT
GTCCTGCTGA ACCAGTCCCG CGCGAGGAAG CTGGCGATGC TGCCGCGCAT GATATTGCTA
TGCGGCCGAT ACGAAGGGAT TGACGAGCGT TTTATCGCCC ATGAAGTAAA CATGGAGTTG
TCAATTGGCG ACTATGTGTT GTCTGGCGGT GAATTGGGAG CGGCTGTGGT TGTCGACGCA
GTCACCCGGT TACAGGAGGG GGTATTGAAC GACGCTGAGT CAGCGAAGCA GGACAGCTTC
GAAGCAGCCG ATAGCCTGCT TGATTATCCC CACTACACTC ATCCATCCAA TCATGCTTTT
GGGAATGTTC CCGAAGTATT ACGCTCAGGT AACCATGTTG CGATCACGCG TTGGCGTCGC
CAGCAGTCGC TGCTGCGCAC TTGGTTGCGG CGACCAGACC TAATAGATGA AGCGAGACTG
TCGAAAGCTG ATCGCTTACT GCTTGATGAG ATTAAGCGCA CACATCCTAT GGATACGGAT
CAAAAAGCGT CAGTCTCTTG GCGTTGA
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| Protein sequence | MIRPVLSRLA GYCFTTASLI QSGFRYPACM RIDVISLFPE FITQCVGFGV IGRAQERGLL
DLHNWNPRDY AQGNYRRVDD RPFGGGPGMV MLIEPLRACL EAVRAADPQP APLIYLSPQG
VLLNQSRARK LAMLPRMILL CGRYEGIDER FIAHEVNMEL SIGDYVLSGG ELGAAVVVDA
VTRLQEGVLN DAESAKQDSF EAADSLLDYP HYTHPSNHAF GNVPEVLRSG NHVAITRWRR
QQSLLRTWLR RPDLIDEARL SKADRLLLDE IKRTHPMDTD QKASVSWR
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