| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0087 |
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| Symbol | rpsP |
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| ID | 6119797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 104280 |
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| End bp | 104540 |
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| Gene Length | 261 bp |
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| Protein Length | 86 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641648172 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001774757 |
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| Protein GI | 170729324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCAAGA TTCGTCTGAC TCGTGGTGGT GCCAAGAAGC GCCCCTTTTA CCAGATCATC
GTTACTGATT CGCGTAACAA GCGCGACGGT CGTAACATTG AGCGCGTTGG CCACTATAAC
CCCGTGGCAC AGGGCGCTGA ATCGCGCGTG GTATTGAATG TGGCTCGTGT CGAGCATTGG
GTCAGAAACG GTGCCCAACT GACAGACAAG GTGCGTAGCT TGCTTAAGGA AGTCAGCAAA
ACCCAGGCGA CTGCGTCCTA A
|
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| Protein sequence | MVKIRLTRGG AKKRPFYQII VTDSRNKRDG RNIERVGHYN PVAQGAESRV VLNVARVEHW
VRNGAQLTDK VRSLLKEVSK TQATAS
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