| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0070 |
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| Symbol | hfq |
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| ID | 6119780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 87835 |
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| End bp | 88113 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641648157 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_001774742 |
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| Protein GI | 170729309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT ACAGGATCCT TTTCTAAACG CATTGCGTCG CGAACGGGTA
CCTGTATCAG TCTATCTAGT GAATGGCATC AAACTACAAG GCACAATCGA ATCATTCGAT
CAATTTGTGG TTCTACTACG TAATACTGTC AGCCAGATGG TGTACAAGCA TGCTATTTCC
ACAGTGGTAC CTGCACGCAA CGTACGAGTT GGGCCAGGTG GAGGCTATGT GCATTCAGGT
AGTGATACGT TACAAATTAA TGATGACGAA GTGGAATGA
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSVYLVNGI KLQGTIESFD QFVVLLRNTV SQMVYKHAIS
TVVPARNVRV GPGGGYVHSG SDTLQINDDE VE
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