Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0064 |
Symbol | |
ID | 6119774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 81497 |
End bp | 82297 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641648152 |
Product | chaperone protein precursor |
Protein accession | YP_001774737 |
Protein GI | 170729304 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00812776 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTCCTC CGATCATGAG AACTCAACAA AGCAAAAGCA TCTGGGTGCT TGCCCTCAGC ACGTGCTTAT GCGCCCAATC CGCTTTCGCC GGCATCATCA TCGCTGGGAC CAGGGTTGTC TATCCCGCAC AATCACGTGA TGTCACCGTA CAAGTGACCA ACACTGGGGA AAACCCTGCA CTGTTACAAA CCTGGATGGA TGACGGCGAC TCCAAGCAAA CACCTGACGA AAGTAAAGCC CCCTTTCTGG TGACGCCTCC TATCAGTCGA GTCGAACCTG GCTCAGGCCA AGCGTTGCGT TTATTTTTTA CGGGCACCAC AACGCTTCCA GAAGATCGGG AAAGCTTATT CTGGTTAAAC GTTCTCGAGA TTCCACCTAC TCCGTTAGAA CATTCCGATA AAAATGCTCC AACTTCCGCT GATAAATCAG ACGGCCAGAA CTACCTGCAA CTCGCATTTC GCTCGCGGAT CAAGGTGTTC TATCGTCCAT CCAAACTCAA AGGAACAGCA AACGAAGCCC CCGCCTCGCT CAGTTGGAAA GTGAATTCCA ACGGGCAATT GCTAGTGAGC AACCCCACAC CTTATCACGT CACGCTCACC CGAACCGAAG CGCTGGATGA CAAAGGAAGG AAAGAGACAA TTGACAAAAT TGGAGTGTTG TTAACCCCTG GCCAGGAATA CACATTCAAA GCGAACAAAT CGGATGGACT CTCATCACGG TGGAAAAGTG TGTCTTTTAC CTACATTAAT GATTATGGCG GAATAAAAAC GCTCAGCAGT AATTTGGGAT CAATGCCTTA A
|
Protein sequence | MVPPIMRTQQ SKSIWVLALS TCLCAQSAFA GIIIAGTRVV YPAQSRDVTV QVTNTGENPA LLQTWMDDGD SKQTPDESKA PFLVTPPISR VEPGSGQALR LFFTGTTTLP EDRESLFWLN VLEIPPTPLE HSDKNAPTSA DKSDGQNYLQ LAFRSRIKVF YRPSKLKGTA NEAPASLSWK VNSNGQLLVS NPTPYHVTLT RTEALDDKGR KETIDKIGVL LTPGQEYTFK ANKSDGLSSR WKSVSFTYIN DYGGIKTLSS NLGSMP
|
| |