| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0063 |
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| Symbol | |
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| ID | 6120572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 78765 |
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| End bp | 81470 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641648151 |
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| Product | outer membrane usher protein precursor |
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| Protein accession | YP_001774736 |
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| Protein GI | 170729303 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0335545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC AGGAAATATC GCAACGGAGG AAGGTTGGCT CCCTTCAGCT CAGTAGCGTG
AAATTTGTCA CAGAATCCGA GATCGATTCC AACCGTAAGC TGATGGCACC CGAGCTGGAT
TTAACACAAA TCAGAGGGCG CTATTTCAAG CAACGCGTGT TGGTCGCTGC AATCGCTTCG
ACTTGCACAC TAATGATGTC AAGATTGGCT TGCGCGGAAA CGGAGCCTGA TAATCTTGGA
CAGCGCATGC TGGTGGCTAA AGCGGATAAC ACCGCGCCAC AACGTGTAGC GCAAACGGCA
AATTTCAACA ATAGTTTTCT GGTTGGCCAA GCGCGTTCCG TTGACTTAGG AATGTTTTCC
CGAGGCAATC CTGTTATTGC AGGCCTCTAC CGTGCTGACC TTTATGTAAA CGGCCAATGG
AAAGGCCGGC GTGATATGGA ATTTCGTAAT ACTAAGGATG ACAAGGAAGC TGTCACTTGC
ATGACGCTCG CCATGCTGGA TGAACTCGGC ATTGATACAT CGGCGCTAAC AGACTCAGCG
GCTGACATGC AGGCATGCAA AACCATCGAC CAATGGCTGC CGGATGCCTA TGCACGTTTC
GATGTAGCCA CTCAGCGCTT GGACGTAAGC ATCCCACAAG CCGCTATGCG ACGCTCAGCA
CGTGGCTATG TCAGCCCATC ACTCTGGGAT CATGGTGTCA ATGCGGGATT CATCGGCTAT
GCCTTCAACT GGTATGGTGG CCGCAATGCA AATGCAATAA ATAGCAGACG GCGTAGTGAT
TCAGCCTATC TTGGAATCAA CAGCGGCTTG AATCTAGGCG ATTGGCAATT TCGCCATAAT
TCCAGTTACA GCTGGCATTC CAATGAAGGA TCGCTGTGGC AGAACATTTC CACTTACGCA
CAACGCGCAT TTCCGAACAC AAGTAGCATG CTGACAGTAG GCGACGCCTA CACCAGCGGC
GAATTATTTG ATTCTATCGG TTTCCGTGGT ATCAACTTGG CAACCGATGA CCGCATGTTG
CCAGACTCGT TACGTGGCTA TGCGCCTATC GTCCGTGGTA TCGCGCAAAG TAATGCGCGT
GTGGAGATAC GCCAGAACGG CCAGTTGATC TACAGCACCA CGGTTGCGCC CGGGGCGTTC
GTCATCGACG ATCTATATCC CACCGGCTAT GGAGGTGACT TACAGGTCAC GGTCTATGAG
ACCGACGGCC GCCAACAGCA GTTCAGTGTC CCCTATGGGT CTGTACCGCA AATGCTCCGA
GCGGGGTCGC AGCGGTACAG CCTAACAGCC GGCAAGATTC GCAATAACAA TCTCAGTCAT
ACCCCTTACT TGTTAGAGGG GACGTATCAA CGCGGCATTA GCAACGCACT CACCGCTTAT
GCAGGCAGCA CGATCAGTCA GCGGTACATC GCAGCGATAG CAGGGGCAGG TGTCTCTACC
CCAGTTGGTG CATTTTCCTT GGACGGTACC GTCGCACGCA CAAAGCTACG TAACGACACA
TTTAGCGGTA CGAGTCTACG CTTAAGCTAC AGCAAGTTAC TGAGCCCAAC CAATACCAAT
ATCACACTCG CTGCATATCG GTATTCGACA TCAGGCTTTT ATGGCTTGCA AGAGGCGATC
ATGGCGATGG ACTACGAAAG GCGCGGCCTT AGTACAGCGT CAATTTATAG ACAGCGCAGT
CAGCTTCAAC TCACTGTGAG CCAACAACTA GGACAGTATG GTTCACTGTA CCTGACAGGA
TCAGCGCGAC AATACTGGAA CCAACGCGGC AACACGATCC AGTACCAGGG AGGCTACAAC
GTATCCTATA AGGGCGTGAG TTACGGCCTC TCAGCGTTAC GCTCACAGAT CCCAAGCATG
CCCAGTGATA CACAAATGCT ATTCACAGTA TCGGTTCCGC TAGGGAAAGC TAATCCGGTG
ATAGTCACTA GCCAAATCGG TTCACGCGAT GGACGCTACG ACAACAGCCG CGTAAGCCTA
GTGGGAGCTA GTGGCAAAGA CAGTGCATTA ACGTATGGGA TAGCCGCATC CGATGCGCGA
AACAGCGCCA CCATGATCGA CGGCAATGTG CAATACCGTA GCCGCTATGC TGCGCTTTCA
GGCAGCTATA GCCATAACCG CAACTATAAT CAGATGAGTC TTGGGGCCAG TGGTAGCATT
GTCCTCCACA GTGGAGTTGC GACACTGGCT CCGCAACGCG GTGACACAAT GGTTATTATC
GAAGCACCGG CAGCCAAGGG CGCCCGCGTA TCCAACATAT CCGGCGTGCG CATTGATAGC
CGTGGCTATG CCGTCGTACC TTATGTCTCA CCGTATCGAA TGAACACGAT CACCCTTGAT
CCCGAAGGGA CAGATCCGGA TGTGGAACTG GAAACATCCA GCCAGCTTAT CGCTCCCTAT
GCAGGTGCAA TCTCCAAAGT GACTTTTGGA ACACGGAAGG GCCGCGCATT GATCGTTAAT
GCACGCACGC CGACTGGTAA AGCTTTGCCA TTCGGTGCAC AGGTCATTGA TGCCGAAGGA
CAATCAGTTG GCCTGGTGGC GCAGGGTAGC CTCATCTACA TACGCGCAAA AGATCCCCAA
GGCCGCCTGA CCATTAAATG GGGAGATCAA GCGGCACAAC AATGCCGTTT GGAATATCAA
CTTCCTGCCA ACGAAGCTTC GACTCGCCCA AGCAGTTTCA CAACTTTGGA AGCCATATGT
CGATAA
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| Protein sequence | MKKQEISQRR KVGSLQLSSV KFVTESEIDS NRKLMAPELD LTQIRGRYFK QRVLVAAIAS
TCTLMMSRLA CAETEPDNLG QRMLVAKADN TAPQRVAQTA NFNNSFLVGQ ARSVDLGMFS
RGNPVIAGLY RADLYVNGQW KGRRDMEFRN TKDDKEAVTC MTLAMLDELG IDTSALTDSA
ADMQACKTID QWLPDAYARF DVATQRLDVS IPQAAMRRSA RGYVSPSLWD HGVNAGFIGY
AFNWYGGRNA NAINSRRRSD SAYLGINSGL NLGDWQFRHN SSYSWHSNEG SLWQNISTYA
QRAFPNTSSM LTVGDAYTSG ELFDSIGFRG INLATDDRML PDSLRGYAPI VRGIAQSNAR
VEIRQNGQLI YSTTVAPGAF VIDDLYPTGY GGDLQVTVYE TDGRQQQFSV PYGSVPQMLR
AGSQRYSLTA GKIRNNNLSH TPYLLEGTYQ RGISNALTAY AGSTISQRYI AAIAGAGVST
PVGAFSLDGT VARTKLRNDT FSGTSLRLSY SKLLSPTNTN ITLAAYRYST SGFYGLQEAI
MAMDYERRGL STASIYRQRS QLQLTVSQQL GQYGSLYLTG SARQYWNQRG NTIQYQGGYN
VSYKGVSYGL SALRSQIPSM PSDTQMLFTV SVPLGKANPV IVTSQIGSRD GRYDNSRVSL
VGASGKDSAL TYGIAASDAR NSATMIDGNV QYRSRYAALS GSYSHNRNYN QMSLGASGSI
VLHSGVATLA PQRGDTMVII EAPAAKGARV SNISGVRIDS RGYAVVPYVS PYRMNTITLD
PEGTDPDVEL ETSSQLIAPY AGAISKVTFG TRKGRALIVN ARTPTGKALP FGAQVIDAEG
QSVGLVAQGS LIYIRAKDPQ GRLTIKWGDQ AAQQCRLEYQ LPANEASTRP SSFTTLEAIC
R
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