Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0056 |
Symbol | |
ID | 6120565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 71948 |
End bp | 72745 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641648146 |
Product | hypothetical protein |
Protein accession | YP_001774731 |
Protein GI | 170729298 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.046398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTTT GTGAGTTGTT ATTTAATGAT ATTTCCCGCA GAGGTGAGTG GCGTATTCCG GGGCTGGTGG GTCTATTAGC TCACGGCGGT TATCATTTTT TGGTGGTATT AGGCAATGCT GGTGCTGTGG ACATGCATTT TTTCTCTGTT CTTTCTATGA CGTTTTTTGT GATGTCTGGC TTGACAATTT TATTTAGTAC GCATGTGGGG ATGGGGACGG TGGGTGTGGT GGTGTTCCCT CTGGCGGGGT TATTGCTTGC TGTTTATCAC GGTTACGGTC ACTCACCCAG CCCGGAGCTG GGTTGGCGTG TAGAGCTGCA TGCTTGTCTA GCGTTACTAG GCTATGCGAC GTTAGGCATA GCAGCACTAT TGGCGATGAT GTTGTGGTTT CGGGAACGTG CGTTGCGGCG ACGCAATGTT CACCACTGGC GTGGTGCTCT GCCGCCGCTG ACTGAGTTAG AGAAGCTGCT TTTCCGCACG ATCACGTTTG GTTTCATCCT GTTGACCTTC ACTGTATTCA CTGGTTTTTT GTTTGTGAGA GATTTTCTGG AACAGAAGTT GTTGCATAAG AGTGTGCTAA GTGTTCTGTC CTGGGTGATA TTTGGAGGGT TGTTAATTGG ACGCTGGCGG TATGGCTGGC GAGGCATCAA GGCGGTGCAC TGGACATTAA CAGCGATGAT GTTTTTAGTA CTGGCGTTTT TTGGGAGCAA ACTGATGATT GAGCTCATGC TACGTCACCA AAGCAGTTCA GTATCACCCG TCAGGCACGC GTCATACGGA GAGCAAGGAT TGAGATAA
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Protein sequence | MLFCELLFND ISRRGEWRIP GLVGLLAHGG YHFLVVLGNA GAVDMHFFSV LSMTFFVMSG LTILFSTHVG MGTVGVVVFP LAGLLLAVYH GYGHSPSPEL GWRVELHACL ALLGYATLGI AALLAMMLWF RERALRRRNV HHWRGALPPL TELEKLLFRT ITFGFILLTF TVFTGFLFVR DFLEQKLLHK SVLSVLSWVI FGGLLIGRWR YGWRGIKAVH WTLTAMMFLV LAFFGSKLMI ELMLRHQSSS VSPVRHASYG EQGLR
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