Gene Xfasm12_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0046 
Symbol 
ID6121524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp53061 
End bp53843 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID641648133 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_001774724 
Protein GI170729291 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGC GTACTCGGTT GAGTGTCAAC GTTAATAAGA TTGCAGTCTT ACGTAACTCC 
CGTGGTCACG GTGCACCCGA TGTGATACGT GCAGCTAGTG CCTGCATTGA TGCAGGTGCG
CACGGTATTA CGGTGCATCC GCGTCCTGAT GCACGTCATA TCCGCCATGA TGATGTGATC
GGGTTATCGA CTTTGACTCG TGCACGCGGT GTGGAATTCA ACATCGAAGG TAATCCGTTT
GCAGAGCCAC GCGCAGGTTA TTGTGGGCTT CTGGCACTTT GCCGTGAAAC CCGCCCTCAT
CAGGTCACTT TGGTTCCCGA TGGGGATCAG CAGATAACAT CCGATCACGG TTTCGATTTT
GCACGGGAAG GTCCTGGGCT GCGTCCATTG ATTGATGAAA TCAAACAGTG GGGATGTCGC
GTGAGTCTAT TTGTTGACGT TAACGTCACC GGTCTGGCTG ATGCAGCAAT ATGGGGTGTG
GATCGGATTG AACTGTATAC GGGGCCGTAT GCGGAGATGC ATCATGCGGG TTGTTCGGAT
GCGGTGTTGC GTGAATTTGC TACTACAGCA CGTCTTGCGC AGGATGTCGG CTTGGGTGTC
AATGCTGGCC ATGACTTGTC GCAAACGAAT CTTGGTGTGT TTTTAGGGGC TGTCCCTGAT
GTGTTGGAGG TTTCGATTGG TCACGCACTG ATCAGTGAGG CGTTATATGA GGGATTAATA
CCAACAGTGC GCCGTTACTT GGATATTCTG GATTCGGTCA ACCCTGCTGT TTCTATGCGT
TGA
 
Protein sequence
MSQRTRLSVN VNKIAVLRNS RGHGAPDVIR AASACIDAGA HGITVHPRPD ARHIRHDDVI 
GLSTLTRARG VEFNIEGNPF AEPRAGYCGL LALCRETRPH QVTLVPDGDQ QITSDHGFDF
AREGPGLRPL IDEIKQWGCR VSLFVDVNVT GLADAAIWGV DRIELYTGPY AEMHHAGCSD
AVLREFATTA RLAQDVGLGV NAGHDLSQTN LGVFLGAVPD VLEVSIGHAL ISEALYEGLI
PTVRRYLDIL DSVNPAVSMR