| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0043 |
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| Symbol | uvrD |
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| ID | 6121521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 46435 |
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| End bp | 48606 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641648130 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001774721 |
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| Protein GI | 170729288 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.779926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGATC ACTTAAATCA GAACCAGCGC GAGGCCGTTG CTGCAGCTCC CGGCCACTAC
CTGATCCTCG CCGGTGCCGG ATCAGGAAAA ACCCGCGTTC TCACTCATCG CATCGTTTGG
CTCAACGAGG TAAATGGGGT ACCCACCCAC AGCATGATGG CCGTCACCTT CACGAACAAG
GCCGCCGGCG AAATACAACA ACGGATTGAT CTACAACTGC GCCACGGCAA ACGCGGCATG
TGGATCGGGA CCTTCCATAG CCTGGCGCAT CGCTTACTGC GCCTGCATTG GAACGACGCA
ACATTACCCG AAAACTTCCA GGTCATAGAC AGCGACGATC AATTGCGCCT CGTCAAACGA
GTGATCCAGT CCTTGGGATT GAATGACACC CTCTTCCCTC CCAAACAGGC GATGTGGTGG
ATTAATACAC AGAAAGATGA AGGACGCCGC CCAGAGCACA TCCAACCCGA GTCACACGAC
GACTGGATCG AGACGCAACG CCGCATCTAT ACCGAGTATC AGGAGCGCTG CAACCGCGCT
GGTTTGGTCG ATTTTTCGGA ACTGCTGCTG CGGGCACATG AACTACTACG CGATACACCT
GCACTACTGA CACACTACCG TTCGCGCTTC CGTGAGATTC TGATCGACGA ATTCCAAGAT
ACCAACGCCA TCCAGTACGC GTTTGTGCGT GTCCTTGCCA ATGACACTGG CCACATCTTC
GCCGTCGGCG ATGACGATCA AGCCATCTAC GGCTGGCGTG GTGCCAAAGT TGAGCATGTA
CAACACTTCC TGAAAGATTT TCCAAACGTG CAGACCATCC GCTTGGAGCA AAATTACCGC
TCCAGCGCCA ATATCCTTGA CGCTGCCAAC GCAATCATTG CCCATAACCC AGACCGAATT
GGCAAACGCC TCTGGACTGA ATCCGGTGTT GGTGAATCCA TCGACCTATA CGCCGCCTAC
AACGAGATTG ATGAAGCCCG CTACATCGTC GAACGCGCCC GCCAGTGGGT ACGCGACGGC
GGCAGCTACG GCGAGATCGC AGTGCTTTAC CGTAGTAACG CACAGTCCCG CGCGTTTGAA
GAAGTGCTGC AATCCGAACA TATCCCCTAC CGTGTTTACG GCGGCATGCG CTTCTTCGAG
CGTGCCGAAA TCAAGGATGC CCTAGCCTAT CTGCGCCTGC TTGCCAATCG TAGCGATGAT
GCTGCGTTCG AACGCGTTGT AAATACCCCC GTACGCGGCA TCGGTGAGCG CACCTTAGAT
GAAGTAAGAC ACCTAGCACG TACCCAAGGC TTAGCACTAT GGGATGCGGC AATGGCATGT
ACCCAATCAA CCACGCTGAC CGCGCGCGCG CGTAACGCCT TGGCGAGTTT CCTCAATTTA
CTGCAACAAC TTGCGGTGGA AACCAACCAG ATGGGTTTAG CCGAACGAAT TGACCATATG
CTGCAGCGTT CGGAGTTACG CCAGCACTGG AAGAAAGAAG CGCGTGGTTC TCTGGATGCC
GAATCACGTC AAGAAAACTT AGACGAACTT GTTTCCGTCG CTTCACGCTT TGTCCTTCCG
CAAAACGACG AAGACACACC CATCATGACC GAATTAGACG CGTTCCTATC CTACGCGTGC
CTGGAAAGTG GTGATGGTCA AGTCCAAGCC GGGGAAGAAG GCGTACAACT GATGACCCTA
CACTCAGCCA AAGGCTTGGA ATTTCCCCTA GTCTTCTTGG TGGGCTTGGA AAATGGATTA
TTCCCCAGCG CGCGTTCCCT GGATGAACAC GACCGACTAG AGGAAGAACG CCGCTTAGCG
TATGTCGGCA TCACCCGCGC CCGTCACAAA CTCATCCTCA GCTATGCCCA AGCACGGCGT
ATCCACGGTA AAGATAACTA CAACGTCCCC TCACGCTTTT TACGCGAGAT CCCGCAGAAT
CTATTGCATG AAGTACGCCC CACCATCCAG GTCTCACACC AGACCCCATT AGGAGCAGTG
CAACGTCCAG CCCATGATGA ACGCGACGCA GCACCTATCA AGCTCGGCGT GAACGTCATG
CACCCTACAT TTGGGTGCGG CGTGGTTGTC GACTACGAAG GCAGCGGCGC GCACACCCGC
GTACAAATCA AATTCGATGA CGCCGGTACA AAATGGTTGG TCATGGCATA CGCCAAACTC
AGCGTGGTAT AG
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| Protein sequence | MLDHLNQNQR EAVAAAPGHY LILAGAGSGK TRVLTHRIVW LNEVNGVPTH SMMAVTFTNK
AAGEIQQRID LQLRHGKRGM WIGTFHSLAH RLLRLHWNDA TLPENFQVID SDDQLRLVKR
VIQSLGLNDT LFPPKQAMWW INTQKDEGRR PEHIQPESHD DWIETQRRIY TEYQERCNRA
GLVDFSELLL RAHELLRDTP ALLTHYRSRF REILIDEFQD TNAIQYAFVR VLANDTGHIF
AVGDDDQAIY GWRGAKVEHV QHFLKDFPNV QTIRLEQNYR SSANILDAAN AIIAHNPDRI
GKRLWTESGV GESIDLYAAY NEIDEARYIV ERARQWVRDG GSYGEIAVLY RSNAQSRAFE
EVLQSEHIPY RVYGGMRFFE RAEIKDALAY LRLLANRSDD AAFERVVNTP VRGIGERTLD
EVRHLARTQG LALWDAAMAC TQSTTLTARA RNALASFLNL LQQLAVETNQ MGLAERIDHM
LQRSELRQHW KKEARGSLDA ESRQENLDEL VSVASRFVLP QNDEDTPIMT ELDAFLSYAC
LESGDGQVQA GEEGVQLMTL HSAKGLEFPL VFLVGLENGL FPSARSLDEH DRLEEERRLA
YVGITRARHK LILSYAQARR IHGKDNYNVP SRFLREIPQN LLHEVRPTIQ VSHQTPLGAV
QRPAHDERDA APIKLGVNVM HPTFGCGVVV DYEGSGAHTR VQIKFDDAGT KWLVMAYAKL
SVV
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