| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0042 |
|---|
| Symbol | |
|---|
| ID | 6121520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 44886 |
|---|
| End bp | 46253 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641648129 |
|---|
| Product | acetyl-CoA carboxylase biotin carboxylase subunit |
|---|
| Protein accession | YP_001774720 |
|---|
| Protein GI | 170729287 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACA AAGTCGTTAT TGCCAACCGT GGTGAGATCG CGTTGCGTAT TCTTCGCGCC
TGCCACACGT TGGGTATCCG CACGGTTGCG GTGCACTCTA CCGTTGATCG TAATCTGAAG
CATGTCGCGA TGGCTGATGA GTCGGTGTGC ATTGGCCCGG CACCCTCTGC GGAGAGTTAT
CTCAATATCC CGGCGCTGAT TGCCGCCGCT GAGGTCACGG ATGCTCAGGC CATCCACCCT
GGCTATGGTT TTTTGTCGGA AAACGCTAGT TTTGCTGAAC GTGTGGAACA GTCTGGTTTC
ATTTTCATTG GGCCACGGGC AGAGACGATT CGTTTAATGG GCGACAAGGT GCAGGCTATC
CATGCGATGA AAGCGGCTGG TGTGCCGTGT GTCCCTGGTT CGGATGGTCC ATTGGGTGAT
GACATTGTCG CTAACGTCAA AATTGCACGT GAGATCGGTT ATCCGGTGAT CATTAAGGCT
GCTGGCGGCG GTGGTGGACG TGGGATGCGT GTGGTACATA CCGAGGTTGG TTTAAAGGCG
GCTATTGAAA CTACGCAGTG TGAAGCTAAA GCCGCTTTTG GCAATGGCCA GGTGTATATG
GAAAAGTTTC TGGAGAATCC GCGTCACGTG GAGATTCAGG TGCTCGCCGA TGGTCAGGGG
AACGCGATCC ATTTGGGGGA GCGGGATTGT TCGATGCAAC GCCGCCATCA GAAGGTGGTG
GAGGAAGCCC CCGCACCCGG TATCACTGAG GCGCTGCGCA ATGAAATCGG TCAAGTGTGT
GTAGATGCCT GTATTCGTAT CGGTTACCGC GGTGCTGGGA CGTTTGAATT TCTGTTCGAG
AATGGTCGTT TTTACTTCAT CGAGATGAAT ACGCGCATCC AGGTAGAGCA TCCAGTGACG
GAGCGTATCA CTGGTATTGA CTTGGTATGC GAGCAGTTGC GTATTGCCGC TGGTCAGCCA
TTGAGTATCA AGCAGAGCGA TGTGGTGTTG CGTGGCCATG CGATCGAATG CCGTATCAAT
GCTGAGGATG CGGAGACGTT CTTGCCCAAT CCGGGTTTGA TTACTGCGTT CCATCCACCA
GGTGGTCCGG GTGTGCGTAT GGATACGCAT ATCTACAGTG GTTACAAGGT GCCGCCGAAC
TATGATTCGA TGATCGGCAA GCTCATCGTG CATGGTCCGG ACCGTGAGAC GGCGATTGCG
CGTATGCATT TGGCGCTGAG CGAAATGGTC GTGGATGGGA TCAAGACCAA TATCCCATTG
CAGCAGCGCA TTATGTGCGA TAAGGGTTTC CAGTCCGGTG GACAGAACAT CCATTATTTG
GAGAAGTGTT TGGCGGAGCG TAAGAACCAA ACGATCGGGC GGACCTGA
|
|---|
| Protein sequence | MLDKVVIANR GEIALRILRA CHTLGIRTVA VHSTVDRNLK HVAMADESVC IGPAPSAESY
LNIPALIAAA EVTDAQAIHP GYGFLSENAS FAERVEQSGF IFIGPRAETI RLMGDKVQAI
HAMKAAGVPC VPGSDGPLGD DIVANVKIAR EIGYPVIIKA AGGGGGRGMR VVHTEVGLKA
AIETTQCEAK AAFGNGQVYM EKFLENPRHV EIQVLADGQG NAIHLGERDC SMQRRHQKVV
EEAPAPGITE ALRNEIGQVC VDACIRIGYR GAGTFEFLFE NGRFYFIEMN TRIQVEHPVT
ERITGIDLVC EQLRIAAGQP LSIKQSDVVL RGHAIECRIN AEDAETFLPN PGLITAFHPP
GGPGVRMDTH IYSGYKVPPN YDSMIGKLIV HGPDRETAIA RMHLALSEMV VDGIKTNIPL
QQRIMCDKGF QSGGQNIHYL EKCLAERKNQ TIGRT
|
|---|
| |