| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0025 |
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| Symbol | |
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| ID | 6120886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 24723 |
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| End bp | 25673 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641648112 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_001774703 |
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| Protein GI | 170729270 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCACC AGTTTGCCCT GAAACGCCTC CAGCGTGGTT TCAATCTGAT TGAATTGATG
ATCACATTGG TTCTTGGCCT GCTGGTCGTC CTCGCTGCCA TTTCAATGTT TATATCCAGT
CGTCGGCTTT ATACGACGAC GGAGAATATG AGCCGCCTCC AGGAGTCGGC GCGTGTGGCG
TTTGAACTCA TGGCACGTGA TCTACGCGAG GCCGGTGGTA ATTCCTGCGA CAACACCCTA
CCCGTTGTTA ATGTACTCAG AGATTCCGCC ACAGAATGGT CGCGTAATTG GAATGTACCT
CTCATCGGTT TTGATGGTGG TACCCTGACT CAAGGCGTCA GAGGAACAGA CGCAATCCGC
ATTCTGTCTG CCGGGACCAG CGGAGGTACA GTTAAAAGTC ACAATCCGGT AGACAATACA
ATGACCCTTT ATACGCAAGC CGCCGACTTG CATACCAACG GGATCATGAT GGTGTGCGAT
CCTCAGCAGC TTTCAATATT CCAGGCCAGT AACGTTACTG GAACCACTGT CAGTTATGGC
AATGGTGCAT TGAATTCCTG CACTCACTTT GGTCGTTTGC CATCAGTGTG CAATGCGAAT
CCACCCAATT ATCAGCACCA AGCCAATTCG ATCATCACCG AATTGCGTGC AGTGCAGTGG
TATGTCAGAA CGAATGAGCG TGGCGGAACC TCCCTTTTTC AGGAGATTCG CGGTCCTAAT
GGTGCGATTG CATTGGGCGA AGTCGCGGAA TCTATCAGCG CGATGCAAAT TACGTACTTA
TTAAGAGGTG CTATAAGTTA TGTCAGCGCC GCTCAAGTAT CGGAATGGAA AAATGTCATT
GCGGTTAGAG TTGCCTTGAC GATCCAGACG ACCGACAGAG TGGGTGTTGA TAACAACGTC
GTGTCACGCA CCCTCACCTC CGTCACCAGC TTACGGAACA GAAATTTATG A
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| Protein sequence | MNHQFALKRL QRGFNLIELM ITLVLGLLVV LAAISMFISS RRLYTTTENM SRLQESARVA
FELMARDLRE AGGNSCDNTL PVVNVLRDSA TEWSRNWNVP LIGFDGGTLT QGVRGTDAIR
ILSAGTSGGT VKSHNPVDNT MTLYTQAADL HTNGIMMVCD PQQLSIFQAS NVTGTTVSYG
NGALNSCTHF GRLPSVCNAN PPNYQHQANS IITELRAVQW YVRTNERGGT SLFQEIRGPN
GAIALGEVAE SISAMQITYL LRGAISYVSA AQVSEWKNVI AVRVALTIQT TDRVGVDNNV
VSRTLTSVTS LRNRNL
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