Gene Xfasm12_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0012 
Symbol 
ID6120019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp12597 
End bp13007 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content44% 
IMG OID641648103 
Productbiopolymer transport ExbD2 protein 
Protein accessionYP_001774695 
Protein GI170729262 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA GTAGTGGTAG CAACCGTGGC CCGATGGCAG ATATCAATGT CACTCCTCTT 
GTGGATGTGA TGTTGGTGTT ATTAATTATC TTCATCGTTA CTGCGCCGAT CATGACCTAT
CCAATTGCCG TGGATTTACC TCAGAGAGTG CTGAATCCGC CACCGATGGA TCATGAACCG
CCGCCGCCAA TTCAATTGAA GATTGATGCT AGCAATCAAA TCTATTGGAA CAACACTTTG
GTTGCGGTGA GCCAATTGCA GCAGCGTATG GAGGAAGTAG TGCAGAAAGA TCCAACCAAC
CAACCACAAT TGCAAATTGA TGCTAATCCA GACTCAGAAT ATGAAGTGAT TGCTAAAGTC
CTAGCTGCTG CTAAAAACGC AGATATGAAG AAGATTGGAT TTCATGAGTA G
 
Protein sequence
MAFSSGSNRG PMADINVTPL VDVMLVLLII FIVTAPIMTY PIAVDLPQRV LNPPPMDHEP 
PPPIQLKIDA SNQIYWNNTL VAVSQLQQRM EEVVQKDPTN QPQLQIDANP DSEYEVIAKV
LAAAKNADMK KIGFHE