Gene Xfasm12_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_0007 
Symbol 
ID6120014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp8032 
End bp8847 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content51% 
IMG OID641648098 
Producthypothetical protein 
Protein accessionYP_001774690 
Protein GI170729257 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATCGTTTTT CTTGATAGCG ACACTGTCGC TTGGCGCTTG TTCAACAGCC 
ACCTCTCCGA CGGGTCGGCA TCAGGTTTTT AGTGGTGTTT CGCAGCAGCA GCTTAATCAA
CTGGGTGAGC AGGCATTTGT TGAGATAAAG GCCAAGGAGA AAATCAGTGG CAATGTGCGT
CAGAATGCTT ATGTACGTTG CGTTGTTGAT GCTTTGGTTA CAGAACTGCC GTTACAGTGG
CGCCATGTGA AGTGGGAAAC TGTGCTGTTT TTTAACGAAG AACCGAATGC CTTTGCTTTA
CCTGGCGGGA AAGTTGGGGT TAATACTGGA ATCTTCCGTG CGGCAAAAAA TCAAGAACAG
CTCGCTGCTG TGCTAGGTCA CGAAATTGGT CACGTCGTCT CGCGTCATCA TGAGGAGCGT
ATTACTTGGC AACTTGGTAC TCAGGCCGGT TTAGGATTAC TTGGTGTATT GGCAGGTACT
GCGTATGGAG ACAGTGCTGC TACTGCGGTT AACCAGATAG GTGGACTGAC TGCTCAAGCT
GCGTTTCTGT TGCCCGGCTC GCGTACCCAG GAGCGTGAGG CCGATATTGT TGGGCAGCGC
CTCATGGCCC AGGCTGGTTT TGATCCTATC CAAGCGGTTT ACCTTTGGAA GAATATGTTG
GCTATTGCAG GGCAGAGACC GCCGCAGTGG TTGTCCACTC ACCCAGATCC GACCAATCGT
ATTCGTCAAT TGGAGCAGCA AAGTACGGTA TTAGCATCGG TTTACGCTCA GGCACGTGAC
GCTGGACGTG TGCCGCATTG CAGTCCTGCA GCATAG
 
Protein sequence
MKKLSFFLIA TLSLGACSTA TSPTGRHQVF SGVSQQQLNQ LGEQAFVEIK AKEKISGNVR 
QNAYVRCVVD ALVTELPLQW RHVKWETVLF FNEEPNAFAL PGGKVGVNTG IFRAAKNQEQ
LAAVLGHEIG HVVSRHHEER ITWQLGTQAG LGLLGVLAGT AYGDSAATAV NQIGGLTAQA
AFLLPGSRTQ EREADIVGQR LMAQAGFDPI QAVYLWKNML AIAGQRPPQW LSTHPDPTNR
IRQLEQQSTV LASVYAQARD AGRVPHCSPA A