| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_7036 |
|---|
| Symbol | |
|---|
| ID | 6125945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 1158128 |
|---|
| End bp | 1159036 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641648040 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001774632 |
|---|
| Protein GI | 170735518 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.753996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.202987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGT CATTCGAAGC GCTCGAAGCC CTGGACGCGA TCGACCGCAC CGGCACCTTT
GCCGAAGCAG CGGAACTGCT GCATCGTGTC CCGTCCGCGC TCACCTACCT GGTGCAGAAA
CTCGAAAGCG ATCTCGGCGT GGCGCTGTTC GACCGCAGCG GACGGCGCGC GAAGCTCACG
CATGCGGGCC GCATCGTCGT CGAGGAGGGC CGGCGCCTGC TGCGTGCGGC CGAGCAGCTC
GAAATGAAGG CGCTGCGTGC GCAACAGGGC TGGGAAACGG AAGTGCGCGT CTGTATCGAC
GAAATCCTGC CGTTCGACGC GCTGTGGCCG TACGTCCACC GGTTCTACGC GCTCGGGATG
GACACGCGGT TGCGGCTGTC GACGGAAGTG CTCGGCGGCG CATGGGATGC GCTGATTTCG
CGGCGGGCGG ATCTCGTCGT CGGCGCGGCG GGCGAACCGC CGGAATTGCC GGGCATCGTC
GCACGGCCGA TCGGCTCGCT GAAACACGTG TTCGCGGTCG CGCCGTCCCA TCCGCTCGCT
GCGCTGCCCG AACCGCTGTC GATGGCGTCG GTCGTCCAGT ATCGCGGCGC GGTGATCAGC
GATACGTCGC GCGAACTGCA GCCGCAGTCG GTCGCGATCG ATGCGGGCCA GCCGTATCTC
GCGGTACCGA CGCTGGCCGC GAAGCTGGAA GCGCAATGCG AAGGGCTCGC GGTCGGCACG
CTGCCGGAAT GCATCGCGGC GCGCGCGATC GCCGACGGCA AGCTCGTCGC GCGCCAGGTG
ACCGGCATGC GCGATACCAC GCACTGCTAT CTCGCGTGGC GCGGCGACGA GGCGGGCCGC
GCGCTGCACT GGTGGGTCGA ACAACTCGAC CAGCCCGATC TCGTCGATCG TTTCACGACG
CCGGACTGA
|
|---|
| Protein sequence | MKLSFEALEA LDAIDRTGTF AEAAELLHRV PSALTYLVQK LESDLGVALF DRSGRRAKLT
HAGRIVVEEG RRLLRAAEQL EMKALRAQQG WETEVRVCID EILPFDALWP YVHRFYALGM
DTRLRLSTEV LGGAWDALIS RRADLVVGAA GEPPELPGIV ARPIGSLKHV FAVAPSHPLA
ALPEPLSMAS VVQYRGAVIS DTSRELQPQS VAIDAGQPYL AVPTLAAKLE AQCEGLAVGT
LPECIAARAI ADGKLVARQV TGMRDTTHCY LAWRGDEAGR ALHWWVEQLD QPDLVDRFTT
PD
|
|---|
| |