| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_7028 |
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| Symbol | |
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| ID | 6125937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 1148033 |
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| End bp | 1149061 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641648032 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001774624 |
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| Protein GI | 170735510 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.146297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.512794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAC CCTCTCCCGC ACCGTCGCCC GTTGCGCCCG CGCGTTCACG GCGACTGGCC
GTCGTCGCGA TCGCCGTGAT CGCGCTGCTG CTGGTCGCAC TGCTCGTGTA CGAGTTCGAC
GCACGCGATC GCGGCACCGA CGACGCGTAC GTGACCGGCC ACCTGCACGT GATCTCGCCG
CGCGTCGCCG GCACGGTCGA GCGTGTGCTC GTCGACGACA ACCAGTTCGT GCATGCGGGC
GACGCGCTCG TGCAGATCGA CCGGCGCGAC TTCGACGTGC GCGTCGCGGC GCAGCGCGCC
CGCGTCGCCC AGGCGCATGC CGATGCGAGC CGCGCACGCG CGCTGATCGA GCAGGCGGAA
GCGGCGCTCG TGTCGGCGCA CGCCGATGCC GAAAAGGCCG AACTCGATTA CGCCCGTGCA
CGCGAACTGA CCCGCGAAAC GCCGCGCGGC CTGTCGAAGC AGGAGTTCGA TGCGGCCGAT
GCCGCCCGCA AGTCGGCCCG CGCGCGCGTC GCGGCAGCCG ATGCGCAACG GCGCAGCGCG
CTCGCCGCCG CTCAGGCCGC CGATGCCGCG TCGAGCCAGA ACGACGCCGA GTTGCACGAC
GCGCTGCTGC AGCTCGGCTA CACGGCGGTC GTCGCGCCGT CGGACGGCTA CGTCGGCAAG
AAGACCGTCG AGACCGGCGA GCATGTCGCG CCCGGCCAGG CGCTGCTCAC GCTGGTCGAG
CCGCATCCGT GGGTCGTCGC CAATTTCCGC GAGACGCAGC TGCGGCACGT GCGCGCCGGC
GACGCCGTCC AACTGCGCTT CGATGCGCTG CCGCAGCGCA CGTTCAGCGG CCGCATCGAC
AGCCTGTCGC CCGCGACCGG CGGGCAGTTC GCGCTGCTGC CGCCCGACAA CGCGACCGGC
AATTTCACGA AGGTCACGCA GCGCGTGCCC GTGAAGATCC TGCTCGACGG ACCGGCCGCG
ACGGAGCCGC GCATCCGGCC CGGGCTGTCG GTCGTCGTCA CGCTGCAACC CGGCAGCGAA
TCGCGATGA
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| Protein sequence | MTPPSPAPSP VAPARSRRLA VVAIAVIALL LVALLVYEFD ARDRGTDDAY VTGHLHVISP
RVAGTVERVL VDDNQFVHAG DALVQIDRRD FDVRVAAQRA RVAQAHADAS RARALIEQAE
AALVSAHADA EKAELDYARA RELTRETPRG LSKQEFDAAD AARKSARARV AAADAQRRSA
LAAAQAADAA SSQNDAELHD ALLQLGYTAV VAPSDGYVGK KTVETGEHVA PGQALLTLVE
PHPWVVANFR ETQLRHVRAG DAVQLRFDAL PQRTFSGRID SLSPATGGQF ALLPPDNATG
NFTKVTQRVP VKILLDGPAA TEPRIRPGLS VVVTLQPGSE SR
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